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BaseInfo

ncRNA ID novel_ahy_miR770
Species Arachis hypogaea
Class miRNA
Genome position Araip.B07:8135100-8135258 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AGAGACUUAAUUACAAAAUCUGAU - 24
Stem-loop(if miRNA) --UAA             A        AUUACAAAAAUA       C   UA        AU             - UA      C
     AUUUUGUAAUUAA UUUCUGUU            UUAGAAU AAC  AAUAUUUU  UAAAUAAAAUAAA A  UUUAAU A
     ||||||||||||| ||||||||            ||||||| |||  ||||||||  ||||||||||||| |  |||||| A
     UAAAACAUUAAUU AGAGACAG            AAUUUUA UUG  UUAUAAGA  AUUUGUUUUGUUU U  GGAUUA A
UAGUC             C        ------------       A   UC        -C             A GC      U
Stem-loop sequence UAAAUUUUGUAAUUAAAUUUCUGUUAUUACAAAAAUAUUAGAAUCAACUAAAUAUUUUAUUAAAUAAAAUAAAAUAUUUAAUCAAAUAUUAGGCGUAUUUGUUUUGUUUACAGAAUAUUCUGUUAAUUUUAAGACAGAGACUUAAUUACAAAAUCUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ738748.1
ncRNA:24   UAG---UCUAAAACAUUAAUUCAGAGA   1
  ||=---|*|||||*||||||||||*||
targets:798   AUUUUAAAAUUUUAUAAUUAAGUCCCU   824

2.5 TSA: Arachis hypogaea CL12540Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01026550.1
ncRNA:24   UAGUCUAAAACAUUAAUUCAGAGA   1
  *|==*||*|||||||||||||*||
targets:1170   UUUGCAUAUUGUAAUUAAGUCCCU   1193

2.5 TSA: Arachis hypogaea Unigene26567 mRNA sequence NA coding protein psRNATarget
JR568552.1
ncRNA:24   UAGUCUAAAACAUUAAUUCAGAGA   1
  *|==*||*|||||||||||||*||
targets:1081   UUUGCAUAUUGUAAUUAAGUCCCU   1104

2.5 TSA: Arachis hypogaea Ahy.Unigene28815 mRNA sequence NA coding protein psRNATarget