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BaseInfo

ncRNA ID novel_ahy_miR733
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:14494666-14494870 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 182 - UAACUAAUAGCAUACAUGACACAU - 205
Stem-loop(if miRNA) --   C          C    C  AUAAC    UC    A         U           C      C   C          -----  AG      UU  GAU
  UAA UAAUAGCAUA AUGA AC     AUGU  AAUU GAUAUUGAC AAAUAUGUUUA GAAAAU UAU AAUUUAGUUA     CU  GUUAUA  AA   U
  ||| |||||||||| |||| ||     ||||  |||| ||||||||| ||||||||||| |||||| ||| ||||||||||     ||  ||||||  ||
  AUU AUUAUUGUAU UAUU UG     UACA  UUAA CUAUAACUG UUUAUAUAAAU CUUUUA AUA UUAAAUCAGU     GG  UAAUGU  UU   A
UA   A          A    A  GAAUA    GA    C         U           A      A   A          AAAAA  AU      UU  AGG
Stem-loop sequence UAACUAAUAGCAUACAUGACACAUAACAUGUUCAAUUAGAUAUUGACUAAAUAUGUUUACGAAAAUCUAUCAAUUUAGUUACUAGGUUAUAUUAAGAUUAGGAUUUUUGUAAUUAGGAAAAAUGACUAAAUUAAUAAAUUUUCAUAAAUAUAUUUUGUCAAUAUCCAAUUAGACAUAUAAGGUAUUAUAUAUGUUAUUAAUUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   UACACAGUACAUACGAUAAUCAAU   1
  ||||||||||||||||||*|||||
targets:723   AUGUGUCAUGUAUGCUAUCAGUUA   746

1.5 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget