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BaseInfo

ncRNA ID novel_ahy_miR727
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:36260660-36260808 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AGAGCUCUGAUACCAUGUCAUGAA - 24
Stem-loop(if miRNA) --    C  -       A      GAAACCA   GUCCCAAAA        UA      ---AA  GUAAAACUAAUGGUU
  AGAG UC UGAUACC UGUCAU       CUC         GCUUAAGC  AUAGGA     AG               A
  |||| || ||||||| ||||||       |||         ||||||||  ||||||     ||
  UCUC AG AUUAUGG ACGGUA       GAG         UGAAUUCG  UAUUCU     UU               U
AA    C  C       A      -------   ACUUAAUAC        --      GAGAC  ACCAUCCUACAAUGU
Stem-loop sequence AGAGCUCUGAUACCAUGUCAUGAAACCACUCGUCCCAAAAGCUUAAGCUAAUAGGAAAAGGUAAAACUAAUGGUUAUUGUAACAUCCUACCAUUCAGAGUCUUAUGCUUAAGUCAUAAUUCAGAGAUGGCAAGGUAUUACGACCUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01014150.1
ncRNA:24   AAGUACUGUACCAUAGUCUCGAGA   1
  |||||||=||||||||||||||||
targets:158   UUCAUGAUAUGGUAUCAGAGCUCU   181

1.0 TSA: Arachis hypogaea Unigene14158 mRNA sequence NA coding protein psRNATarget
JR574680.1
ncRNA:24   AAGUACUGUACCAUAGUCUCGAGA   1
  ||||||||||||*|||||||||||
targets:44   UUCAUGACAUGGCAUCAGAGCUCU   67

1.5 TSA: Arachis hypogaea Ahy.Unigene37717 mRNA sequence NA coding protein psRNATarget
GAER01007492.1
ncRNA:24   AAGUACUGUACCAUAGUCUCGAGA   1
  ||||||||||||*|||||||||||
targets:107   UUCAUGACAUGGCAUCAGAGCUCU   130

1.5 TSA: Arachis hypogaea Unigene7499 mRNA sequence NA coding protein psRNATarget
GAER01002338.1
ncRNA:24   AAGUACUGUACCAUAGUCUCGA-GA   1
  *|=|||||||||||||||||||-||
targets:214   AUUAUGACAUGGUAUCAGAGCUUCU   238

3.0 TSA: Arachis hypogaea Unigene2339 mRNA sequence NA coding protein psRNATarget