ncRNA ID | novel_ahy_miR727 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B06:36260660-36260808 [+] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGCUCUGAUACCAUGUCAUGAA - 24 |
Stem-loop(if miRNA) |
--    C  -       A      GAAACCA   GUCCCAAAA        UA      ---AA  GUAAAACUAAUGGUU   AGAG UC UGAUACC UGUCAU       CUC         GCUUAAGC  AUAGGA     AG               A   |||| || ||||||| ||||||       |||         ||||||||  ||||||     ||   UCUC AG AUUAUGG ACGGUA       GAG         UGAAUUCG  UAUUCU     UU               U AA    C  C       A      -------   ACUUAAUAC        --      GAGAC  ACCAUCCUACAAUGU |
Stem-loop sequence | AGAGCUCUGAUACCAUGUCAUGAAACCACUCGUCCCAAAAGCUUAAGCUAAUAGGAAAAGGUAAAACUAAUGGUUAUUGUAACAUCCUACCAUUCAGAGUCUUAUGCUUAAGUCAUAAUUCAGAGAUGGCAAGGUAUUACGACCUCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01014150.1 |
|
1.0 | TSA: Arachis hypogaea Unigene14158 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR574680.1 |
|
1.5 | TSA: Arachis hypogaea Ahy.Unigene37717 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01007492.1 |
|
1.5 | TSA: Arachis hypogaea Unigene7499 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01002338.1 |
|
3.0 | TSA: Arachis hypogaea Unigene2339 mRNA sequence | NA | coding protein | psRNATarget |