Search result

BaseInfo

ncRNA ID novel_ahy_miR718
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:21874991-21875050 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 22
Mature sequence(if miRNA) 39 - CCUCUCUAGGCGUUUGGAUGCU - 60
Stem-loop(if miRNA) -     -     C   UG A    G UCUU
 CCUCU CUAGG GUU  G UGCU G    U
 ||||| ||||| |||  | |||| |    U
 GGGGA GGUCC CAG  C GCGG U    C
G     A     A   GU -    G UUCU
Stem-loop sequence CCUCUCUAGGCGUUUGGAUGCUGGUCUUUUCUCUUUGGGCGCUGGACACCUGGAAGGGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR573594.1
ncRNA:22   UCGUAGGUUUGCGGAUCUCUCC   1
  ||==||||||||||*|||||||
targets:172   AGUGUCCAAACGCCCAGAGAGG   193

2.5 TSA: Arachis hypogaea Ahy.Unigene36631 mRNA sequence NA coding protein psRNATarget
GAER01013058.1
ncRNA:22   UCGUAGGUUUGCGGAUCUCUCC   1
  ||*|||||=||||||||*||||
targets:259   AGAAUCCAGACGCCUAGCGAGG   280

2.5 TSA: Arachis hypogaea Unigene13066 mRNA sequence NA coding protein psRNATarget
GAER01049554.1
ncRNA:22   UCGUAGGUUUGCGGAUCUCUCC   1
  ||*|||||=||||||||*||||
targets:361   AGAAUCCAGACGCCUAGCGAGG   382

2.5 TSA: Arachis hypogaea Unigene49591 mRNA sequence NA coding protein psRNATarget
GAER01010736.1
ncRNA:22   UCGUAGGUUUGCGGAUCUCUCC   1
  =**=|||||||||||||*||||
targets:176   GAAGUCCAAACGCCUAGCGAGG   197

2.5 TSA: Arachis hypogaea Unigene10743 mRNA sequence NA coding protein psRNATarget