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BaseInfo

ncRNA ID	ath-miRf10388-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UUCUACUCGACCAGGGGGUCGAGUA - NA
Stem-loop(if miRNA)	G          AGG           --U G    -A  GACAAG CG          CUC    U AU      G G CG UACUCGACCC   UGGUCGAGUAG   G GUCG  GU      U  GAGUCUUCUU   UUCC C  GCUCGA U U || ||||||||||   |||||||||||   | ||||  ||      |  ||||||||||   |||| |  |||||| | GU AUGAGCUGGG   ACCAGCUCAUC   C UAGU  CG      A  CUCAGAAGAG   AAGG G  UGAGUU G C   G          -GG           UUU G    AG  -----A AU          -CU    C --      G U
Stem-loop sequence	CGGUACUCGACCCAGGUGGUCGAGUAGUGGGUCGAGUGACAAGUCGGAGUCUUCUUCUCUUCCUCAUGCUCGAGUGUCUGGUUGAGUGCGGAAUCGAGAAGACUCUAAAGCGAUGAUGCUUUCUACUCGACCAGGGGGUCGAGUAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183042.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *|||||||||||||||||||||||= targets:1572   CACUCGACCCCCUGGUCGAGUAGAG   1596 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *|||||||||||||||||||||||* targets:125   CACUCGACCCCCUGGUCGAGUAGAU   149 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *|*||*|||||*||||||||||||| targets:170   CAGUCAACCCCGUGGUCGAGUAGAA   194 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *|||||||||||||||||||||||* targets:500   CACUCGACCCCCUGGUCGAGUAGAU   524 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *|*||*|||||*||||||||||||| targets:545   CAGUCAACCCCGUGGUCGAGUAGAA   569 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *|||||||||||||||||||||||* targets:500   CACUCGACCCCCUGGUCGAGUAGAU   524 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *|*||*|||||*||||||||||||| targets:545   CAGUCAACCCCGUGGUCGAGUAGAA   569 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *||||||||||*||||||||||||| targets:490   CACUCGACCCCGUGGUCGAGUAGAA   514 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *|||||||||||*|||||||||||| targets:1105   CACUCGACCCCCAGGUCGAGUAGAA   1129 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
DQ069808.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *||||||||||||||||||||||** targets:91   CACUCGACCCCCUGGUCGAGUAGCU   115 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:25   AUGAGCUGGGGGACCAGCUCAUCUU   1   *||||||||*||*|||||||||||| targets:450   CACUCGACCACCAGGUCGAGUAGAA   474 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget