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BaseInfo

ncRNA ID novel_ahy_miR713
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:52410717-52410807 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 68 - UACACUGUAAACGAGAUAAGGCUG - 91
Stem-loop(if miRNA) --    C                C  AAGA    A GUCAUAUCACG
  UACA UGUAAACGAGAUAAGG UG    AGAC U           U
  |||| |||||||||||||||| ||    |||| |           U
  AUGU ACAUUUGCUCUAUUCC GC    AUGU G           U
AA    A                A  ---A    - UUGUACACAUA
Stem-loop sequence UACACUGUAAACGAGAUAAGGCUGAAGAAGACAUGUCAUAUCACGUUUAUACACAUGUUGUGUAACGACCUUAUCUCGUUUACAAUGUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   GUCG-GAAUAGAGCAAAUGUCACAU   1
  =*||-|*||||||||||||||||||
targets:77   UUGCACGUAUCUCGUUUACAGUGUA   101

1.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   GUCGGAAUAGAGCAAAUGUCACAU   1
  ||*|||||||||*|||||||||||
targets:43   CAACCUUAUCUCAUUUACAGUGUA   66

1.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GU-CGGAAUAGAGCAAAUGUCACAU   1
  ||-|*=|||||||*|||||||||||
targets:20   CAUGGUUUAUCUCAUUUACAGUGUA   44

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GUCGGAAUAGAGCAAAUGUCACAU   1
  =|**|||||||||||||||*||||
targets:175   UAUACUUAUCUCGUUUACACUGUA   198

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   GUCGGAAUAGAGCAAAUGUCACAU   1
  **|||||||*|||||||=||||||
targets:145   GUGCCUUAUGUCGUUUAUAGUGUA   168

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget