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BaseInfo

ncRNA ID novel_ahy_miR710
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:59562514-59562618 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 82 - ACUGGAUUGAAGAGAGAAACCGGU - 105
Stem-loop(if miRNA) --  UG A   -   A       C  -------       -C          AAACA
  AC  G UUG AAG GAGAAAC GG       UUCUAAA  UGGUUUGAAA     A
  ||  | ||| ||| ||||||| ||       |||||||  ||||||||||     A
  UG  C AAC UUC UUUUUUG CC       AAGAUUU  GCCAAAUUUU     A
UU  GU A   A   A       -  UAAAUUU       UA          AUCCA
Stem-loop sequence ACUGGAUUGAAGAGAGAAACCGGUUCUAAACUGGUUUGAAAAAACAAAAACCUAUUUUAAACCGAUUUUAGAAUUUAAAUCCGUUUUUUACUUACAAACUGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000661.1
ncRNA:24   UGGCCAAAGAGAGAAGUUAGGUCA   1
  ||||||||||||||||||||||||
targets:95   ACCGGUUUCUCUCUUCAAUCCAGU   118

0.0 TSA: Arachis hypogaea Unigene662 mRNA sequence NA coding protein psRNATarget
GAER01048812.1
ncRNA:24   UGGCCAAAGAGAGAAGUUAGGUCA   1
  ||||*|||=*||||||||||||||
targets:109   ACCGAUUUUGCUCUUCAAUCCAGU   132

2.0 TSA: Arachis hypogaea Unigene48849 mRNA sequence NA coding protein psRNATarget
JR542099.1
ncRNA:24   UGGCCAAAGAGAGAAGUUAGGUCA   1
  |=|--|||||||*||||||||||*
targets:495   AUC--UUUCUCUAUUCAAUCCAGG   516

2.5 TSA: Arachis hypogaea Ahy.Unigene1433 mRNA sequence NA coding protein psRNATarget
EZ746410.1
ncRNA:24   UGGCCAAAGAGAGAAGUUAGGUCA   1
  |=|--|||||||*||||||||||*
targets:161   AUC--UUUCUCUAUUCAAUCCAGG   182

2.5 TSA: Arachis hypogaea CL12732Contig1.Arhy mRNA sequence NA coding protein psRNATarget