Search result

BaseInfo

ncRNA ID novel_ahy_miR708
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:76369422-76369492 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - GGGGACUGAAAUUUUUAGAGACGG - 24
Stem-loop(if miRNA) --   C      -       A UU --A  A   C A
  GUC CUAAAA UUUCAGU U  C   GU CCU C A
  ||| |||||| ||||||| |  |   || ||| | A
  CAG GAUUUU AAAGUCA G  G   CA GGA G A
GG   A      U       - GG AAA  G   U A
Stem-loop sequence GUCCCUAAAAUUUCAGUAUUUCAGUACCUCCAAAAAGUAGGGACAAAGGGGACUGAAAUUUUUAGAGACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ733438.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  ||*|=*|*||||||||||||||||
targets:77   CCAUUCCCAAAAAUUUCAGUCCCC   100

2.0 TSA: Arachis hypogaea CL1Contig12454.Arhy mRNA sequence NA coding protein psRNATarget
GAER01027225.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  ||*|=*|*||||||||||||||||
targets:149   CCAUUCCCAAAAAUUUCAGUCCCC   172

2.0 TSA: Arachis hypogaea Unigene27243 mRNA sequence NA coding protein psRNATarget
JR571617.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  *=*|=||*||=||||||||||||*
targets:242   AUAUUUCCAAGAAUUUCAGUCCCA   265

3.0 TSA: Arachis hypogaea Ahy.Unigene33085 mRNA sequence NA coding protein psRNATarget
JR559484.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  *=*|=||*||=||||||||||||*
targets:218   AUAUUUCCAAGAAUUUCAGUCCCA   241

3.0 TSA: Arachis hypogaea Ahy.Unigene19419 mRNA sequence NA coding protein psRNATarget
GAER01027146.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  *=*|=||*||=||||||||||||*
targets:331   AUAUUUCCAAGAAUUUCAGUCCCA   354

3.0 TSA: Arachis hypogaea Unigene27163 mRNA sequence NA coding protein psRNATarget