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BaseInfo

ncRNA ID novel_ahy_miR706
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:111190165-111190291 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AUGUUAGAGACUUAAAUAAGACGA - 24
Stem-loop(if miRNA) --   A                          CG   --C   U     C           CCCU
  GUC UAUUUAAGUCUCUAACGUUUCAAAAU  UCU   AAU UUGUC UGCCGUCAAUU    G
  ||| ||||||||||||||||||||||||||  |||   ||| ||||| |||||||||||    U
  CAG AUAAAUUCAGAGAUUGUAAAGUUUUA  AGA   UUA AGCAG AUGGUAGUUAG    U
AG   A                          --   AAA   C     A           AUAA
Stem-loop sequence GUCAUAUUUAAGUCUCUAACGUUUCAAAAUCGUCUCAAUUUUGUCCUGCCGUCAAUUCCCUGUUAAUAGAUUGAUGGUAAGACGACAUUAAAAGAAUUUUGAAAUGUUAGAGACUUAAAUAAGACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR581961.1
ncRNA:24   AGCAGAAUAAAUUCAGAGAUUGUA   1
  |||||*||||||||||||||||=|
targets:183   UCGUCCUAUUUAAGUCUCUAACGU   206

2.5 TSA: Arachis hypogaea Ahy.Unigene47841 mRNA sequence NA coding protein psRNATarget