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BaseInfo

ncRNA ID ath-miRf10387-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UCUCGGAGUCUCGUCGGAGAGA - NA
Stem-loop(if miRNA)     -C          -CUC           CCAUCUCUCCUC     UUUU
CUCU  UUUCUCCGAC    CUCCGAGAAAC            CUCCA    U
||||  ||||||||||    |||||||||||            |||||
GAGG  AGAGAGGCUG    GAGGCUCUUUG            GAGGU    G
    CU          CUCU           AACGACUACUUU     UCCC
Stem-loop sequence CUCUCUUUCUCCGACCUCCUCCGAGAAACCCAUCUCUCCUCCUCCAUUUUUGCCCUUGGAGUUUCAUCAGCAAGUUUCUCGGAGUCUCGUCGGAGAGAUCGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_128569.4
ncRNA:22   AGAGAGGCUGCUCUGAGGCUCU   1
  |*||||||||||*|||||||||
targets:743   UAUCUCCGACGAAACUCCGAGA   764

1.5 Arabidopsis thaliana UDP-Glycosyltransferase superfamily protein (UGT87A2), mRNA UDP-Glycosyltransferase superfamily protein(UGT87A2) coding protein psRNATarget
NM_001084510.1
ncRNA:22   AGAGAGGCUGCUCUGAGGCUCU   1
  |*||||||||||*|||||||||
targets:590   UAUCUCCGACGAAACUCCGAGA   611

1.5 Arabidopsis thaliana UDP-Glycosyltransferase superfamily protein (UGT87A2), mRNA UDP-Glycosyltransferase superfamily protein(UGT87A2) coding protein psRNATarget
AY093176.1
ncRNA:22   AGAGAGGCUGCUCUGAGGCUCU   1
  |*||||||||||*|||||||||
targets:593   UAUCUCCGACGAAACUCCGAGA   614

1.5 Arabidopsis thaliana putative glucosyltransferase (At2g30140) mRNA, complete cds NA coding protein psRNATarget
AK226350.1
ncRNA:22   AGAGAGGCUGCUCUGAGGCUCU   1
  |*||||||||||*|||||||||
targets:579   UAUCUCCGACGAAACUCCGAGA   600

1.5 Arabidopsis thaliana mRNA for putative glucosyltransferase, complete cds, clone: RAFL05-16-G04 NA coding protein psRNATarget
BX820134.1
ncRNA:22   AGAGAGGCUGCUCUGAGGCUCU   1
  |*||||||||||*|||||||||
targets:567   UAUCUCCGACGAAACUCCGAGA   588

1.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BT006597.1
ncRNA:22   AGAGAGGCUGCUCUGAGGCUCU   1
  |*||||||||||*|||||||||
targets:527   UAUCUCCGACGAAACUCCGAGA   548

1.5 Arabidopsis thaliana At2g30140 mRNA, complete cds NA coding protein psRNATarget
KJ138888.1
ncRNA:22   AGAGAGGCUGCUCUGAGGCUCU   1
  |*||||||||||*|||||||||
targets:527   UAUCUCCGACGAAACUCCGAGA   548

1.5 Arabidopsis thaliana glycosyltransferase (AT2G30140) mRNA, partial cds NA coding protein psRNATarget