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BaseInfo

ncRNA ID novel_ahy_miR705
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:115079368-115079440 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - ACUGAAAUUUUGGAGAUAGAGACA - 24
Stem-loop(if miRNA) --    C          A       -  -  ----U   U
  UUUC AUCUCUAAAA UUUUAGU CC CC     GUG C
  |||| |||||||||| ||||||| || ||     |||
  AGAG UAGAGGUUUU AAAGUCA GG GG     CAC C
AC    A          -       U  A  UUUUU   C
Stem-loop sequence UUUCCAUCUCUAAAAAUUUUAGUCCCCUGUGUCCCCACUUUUUGGAGGUACUGAAAUUUUGGAGAUAGAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ728221.1
ncRNA:24   ACAGAGAUAGAGGUUUUAAAGUCA   1
  |||||||=||||=|||||||||||
targets:232   UGUCUCUGUCUCUAAAAUUUCAGU   255

2.5 TSA: Arachis hypogaea CL1Contig7237.Arhy mRNA sequence NA coding protein psRNATarget
GAER01012473.1
ncRNA:24   ACAGAGAUAGAGGUUUUAAAGUCA   1
  **|||||*||||||||||||||*|
targets:165   AUUCUCUUUCUCCAAAAUUUCACU   188

2.5 TSA: Arachis hypogaea Unigene12481 mRNA sequence NA coding protein psRNATarget
JR580222.1
ncRNA:24   ACAGAGAUAGAGGUUUUAAAGUCA   1
  **|||||*||||||||||||||*|
targets:153   AUUCUCUUUCUCCAAAAUUUCACU   176

2.5 TSA: Arachis hypogaea Ahy.Unigene46102 mRNA sequence NA coding protein psRNATarget