ncRNA ID | novel_ahy_miR704 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B06:116489954-116490167 [-] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAUUUGUUAGACCCGAACCCGGC - 24 |
Stem-loop(if miRNA) |
--                      A          AU      CC                    C   C    C      C   U           GCAA     CUU   CGGGUUCGGGUCUAAUAAAUAG CCCGGUGUAU  UUCGGG  GGGUCUGGGUCACAUCAAAC CGG UUCA CCGGCC AUG GCACCCCUAGU    GGUCU   C   |||||||||||||||||||||| ||||||||||  ||||||  |||||||||||||||||||| ||| |||| |||||| ||| |||||||||||    |||||   GCCCAAGCCCAGAUUGUUUAUC GGGCCAUAUA  AAGCCC  CUCAGACCCAGUGUAGUUUG GUC AAGU GGCUGG UAU UGUGGGGAUCA    UUAGG   A CG                      C          --      AA                    A   A    A      A   U           --AA     UGG |
Stem-loop sequence | CGGGUUCGGGUCUAAUAAAUAGACCCGGUGUAUAUUUCGGGCCGGGUCUGGGUCACAUCAAACCCGGCUUCACCCGGCCCAUGUGCACCCCUAGUGCAAGGUCUCUUCAGGUGGAUUAAACUAGGGGUGUUUAUAGGUCGGAUGAAACUGAGUUUGAUGUGACCCAGACUCAACCCGAAAUAUACCGGGCCUAUUUGUUAGACCCGAACCCGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01004275.1 |
|
0.0 | TSA: Arachis hypogaea Unigene4277 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01024767.1 |
|
1.5 | TSA: Arachis hypogaea Unigene24784 mRNA sequence | NA | coding protein | psRNATarget |