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BaseInfo

ncRNA ID novel_ahy_miR704
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:116489954-116490167 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - CUAUUUGUUAGACCCGAACCCGGC - 24
Stem-loop(if miRNA) --                      A          AU      CC                    C   C    C      C   U           GCAA     CUU
  CGGGUUCGGGUCUAAUAAAUAG CCCGGUGUAU  UUCGGG  GGGUCUGGGUCACAUCAAAC CGG UUCA CCGGCC AUG GCACCCCUAGU    GGUCU   C
  |||||||||||||||||||||| ||||||||||  ||||||  |||||||||||||||||||| ||| |||| |||||| ||| |||||||||||    |||||
  GCCCAAGCCCAGAUUGUUUAUC GGGCCAUAUA  AAGCCC  CUCAGACCCAGUGUAGUUUG GUC AAGU GGCUGG UAU UGUGGGGAUCA    UUAGG   A
CG                      C          --      AA                    A   A    A      A   U           --AA     UGG
Stem-loop sequence CGGGUUCGGGUCUAAUAAAUAGACCCGGUGUAUAUUUCGGGCCGGGUCUGGGUCACAUCAAACCCGGCUUCACCCGGCCCAUGUGCACCCCUAGUGCAAGGUCUCUUCAGGUGGAUUAAACUAGGGGUGUUUAUAGGUCGGAUGAAACUGAGUUUGAUGUGACCCAGACUCAACCCGAAAUAUACCGGGCCUAUUUGUUAGACCCGAACCCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01004275.1
ncRNA:24   CGGCCCAAGCCCAGAUUGUUUAUC   1
  ||||||||||||||||||||||||
targets:135   GCCGGGUUCGGGUCUAACAAAUAG   158

0.0 TSA: Arachis hypogaea Unigene4277 mRNA sequence NA coding protein psRNATarget
GAER01024767.1
ncRNA:24   CGGCCCAAGCCCAGAUUGUUUAUC   1
  |==||||||||||||||=||||||
targets:105   GUUGGGUUCGGGUCUAAUAAAUAG   128

1.5 TSA: Arachis hypogaea Unigene24784 mRNA sequence NA coding protein psRNATarget