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BaseInfo

ncRNA ID novel_ahy_miR700
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:126956455-126956633 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UCUUAUAUGAGUACAUUUGUCGGC - 24
Stem-loop(if miRNA) --U                      U    CAAC    A       G                      A     CCUAA     CAAUUAC
   GACAAAUGUACUCGUAUAAGAA AAAA    AAUU UAACCAC GAAGAUGGUUUCCGUGUGUCAA AGUAC     CGGAC       G
   |||||||||||||||||||||| ||||    |||| ||||||| |||||||||||||||||||||| |||||     |||||
   CUGUUUACAUGAGUAUAUUCUU UUUU    UUAA AUUGGUG UUUCUACCGGAGGCACACGGUU UUAUG     GCCUG       U
CGG                      U    -UCU    C       G                      C     ----A     CAACCAA
Stem-loop sequence UGACAAAUGUACUCGUAUAAGAAUAAAACAACAAUUAUAACCACGGAAGAUGGUUUCCGUGUGUCAAAAGUACCCUAACGGACCAAUUACGUAACCAACGUCCGAGUAUUCUUGGCACACGGAGGCCAUCUUUGGUGGUUACAAUUUCUUUUUUUUCUUAUAUGAGUACAUUUGUCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01033794.1
ncRNA:24   CGGCUGUU-UACAUGAGUAUAUUCU   1
  |==|*|||-||*|||||||||||||
targets:913   GUUGCCAACAUAUACUCAUAUAAGA   937

3.0 TSA: Arachis hypogaea Unigene33816 mRNA sequence NA coding protein psRNATarget