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BaseInfo

ncRNA ID novel_ahy_miR690
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:134016833-134016933 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 78 - UUAAAACAACUAGAACAUCGGUAU - 101
Stem-loop(if miRNA) --          CG           C        U     ------       
  ACCGGUGUUU  GUUGUUUUAAC GUUGAUUU AAUUA      AUAUAUAU
  ||||||||||  ||||||||||| |||||||| |||||      |||||||U
  UGGCUACAAG  CAACAAAAUUG CAACUAGA UUAAU      UAUAUAUA
UA          AU           A        C     AUUUUU       
Stem-loop sequence ACCGGUGUUUCGGUUGUUUUAACCGUUGAUUUUAAUUAAUAUAUAUUAUAUAUAUUUUUUAUAAUUCAGAUCAACAGUUAAAACAACUAGAACAUCGGUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR570006.1
ncRNA:24   UAUGGCUACAAGAUCAACAAAAUU   1
  ||||||=|||||*|||||||||||
targets:244   AUACCGGUGUUCCAGUUGUUUUAA   267

2.5 TSA: Arachis hypogaea Ahy.Unigene30319 mRNA sequence NA coding protein psRNATarget
GAER01005728.1
ncRNA:24   UAUGGCUACAAGAUCAACAAAAUU   1
  =||*=|||||||||*||||||||*
targets:240   GUAGUGAUGUUCUACUUGUUUUAU   263

2.5 TSA: Arachis hypogaea Unigene5733 mRNA sequence NA coding protein psRNATarget