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BaseInfo

ncRNA ID novel_ahy_miR689
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:133615596-133615718 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AAAAUUAAUCGUGGAUGCAUCAAU - 24
Stem-loop(if miRNA) --         C   G              -      U       C   UAAUUAAAAU   A
  AAAAUUAAU GUG AUGCAUCAAUACAU UAUUUA CAUUUUU UUA          GAA U
  ||||||||| ||| |||||||||||||| |||||| ||||||| |||          ||| A
  UUUUAGUUG CAC UACGUAGUUAUGUA AUAAAU GUAAAAA AAU          CUU U
UG         A   -              C      U       A   --CAAAAUAU   U
Stem-loop sequence AAAAUUAAUCGUGGAUGCAUCAAUACAUUAUUUAUCAUUUUUCUUAUAAUUAAAAUGAAAUAUUUUCUAUAAAACUAAAAAAAAUGUUAAAUACAUGUAUUGAUGCAUCACAGUUGAUUUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01046216.1
ncRNA:24   UAACUACGUAGGUGCUAAUUAAAA   1
  =|*||*||||*||||||||||||*
targets:102   GUGGAGGCAUGCACGAUUAAUUUA   125

3.0 TSA: Arachis hypogaea Unigene46251 mRNA sequence NA coding protein psRNATarget