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BaseInfo

ncRNA ID novel_ahy_miR688
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:133239060-133239185 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UUUUCUUUUAUUUAGGUCGUUGCA - 24
Stem-loop(if miRNA) --          U  A    G   C     A          A    A UC  AUAAAA  A   UAA
  UUUUCUUUUA UU GGUC UUG ACCAA UUUUUUUUAA UUAG U  CU      UU AGC   U
  |||||||||| || |||| ||| ||||| |||||||||| |||| |  ||      || |||
  AAAAGAAAAU AA CCAG AAC UGGUU AAAAAAAAUU AAUC A  GA      AA UCG   U
AA          U  A    G   A     -          -    C GA  ------  A   UCA
Stem-loop sequence UUUUCUUUUAUUUAGGUCGUUGCACCAAAUUUUUUUUAAAUUAGAUUCCUAUAAAAUUAAGCUAAUUACUGCUAAAAGAGACCUAAUUAAAAAAAAUUGGUACAAGGACCAAAUUAAAAGAAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR559688.1
ncRNA:24   ACGUUGCUGGAUUUAUUUUCUUUU   1
  *|*=||||*|||||*|||||||||
targets:140   AGAGACGAACUAAAAAAAAGAAAA   163

2.5 TSA: Arachis hypogaea Ahy.Unigene19631 mRNA sequence NA coding protein psRNATarget