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BaseInfo

ncRNA ID novel_ahy_miR687
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:115153174-115153263 [+]
Reference genome Araip_v1.0
Source SRR1323745;SRR2922380;SRR2922381
Length 21
Mature sequence(if miRNA) 70 - UCGGACCAGGCUUCAUUCCCC - 90
Stem-loop(if miRNA) --      UC             C           UGAA  A   G
  GGAAUG  GUCUGGUUCGAGA CAUUCUUUUGA    GC UAG U
  ||||||  ||||||||||||| |||||||||||    || |||
  CCUUAC  CGGACCAGGCUUU GUAAGAAAGCU    UG AUC C
CC      UU             A           --CA  C   A
Stem-loop sequence GGAAUGUCGUCUGGUUCGAGACCAUUCUUUUGAUGAAGCAUAGGUCACUACGUACUCGAAAGAAUGAUUUCGGACCAGGCUUCAUUCCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01004180.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  |||||||||||||||||||||
targets:4   GGGGAAUGAAGCCUGGUCCGA   24

0.0 TSA: Arachis hypogaea Unigene4182 mRNA sequence NA coding protein psRNATarget
GAER01033028.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  |||||||||||||||||||||
targets:703   GGGGAAUGAAGCCUGGUCCGA   723

0.0 TSA: Arachis hypogaea Unigene33050 mRNA sequence NA coding protein psRNATarget
GAER01033028.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  |*|||||||||||||||||||
targets:900   GAGGAAUGAAGCCUGGUCCGA   920

0.0 TSA: Arachis hypogaea Unigene33050 mRNA sequence NA coding protein psRNATarget
GAER01019611.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||||||||||||||||||=
targets:114   CUGGAAUGAAGCCUGGUCCGG   134

1.0 TSA: Arachis hypogaea Unigene19620 mRNA sequence NA coding protein psRNATarget
GAER01019614.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||||||||||||||||||=
targets:114   CUGGAAUGAAGCCUGGUCCGG   134

1.0 TSA: Arachis hypogaea Unigene19623 mRNA sequence NA coding protein psRNATarget
GAER01019610.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||||||||||||||||||=
targets:825   CUGGAAUGAAGCCUGGUCCGG   845

1.0 TSA: Arachis hypogaea Unigene19619 mRNA sequence NA coding protein psRNATarget
JR540911.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||=|||||||||||||||=
targets:928   UUGGGAUGAAGCCUGGUCCGG   948

2.0 TSA: Arachis hypogaea Ahy.Unigene191 mRNA sequence NA coding protein psRNATarget
GAER01021484.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||=|||||||||||||||=
targets:898   CUGGGAUGAAGCCUGGUCCGG   918

2.0 TSA: Arachis hypogaea Unigene21495 mRNA sequence NA coding protein psRNATarget