Search result

BaseInfo

ncRNA ID novel_ahy_miR684
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:58812204-58812330 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - ACUUUAGUGGCUGAUUUUGGUGUA - 24
Stem-loop(if miRNA) --                   -----UA   UU     U          G   UU  -AUU   UUU
  CACUAAAAUCAGUUACUAA       UAU  GUGUA AAAUACAUGU UGG  UA    UAU   C
  |||||||||||||||||||       |||  ||||| |||||||||| |||  ||    |||   A
  GUGGUUUUAGUCGGUGAUU       GUG  CAUAU UUUAUGUACA ACC  AU    AUG   A
AU                   UCAGUUG   GU     -          -   UU  GUUU   UGU
Stem-loop sequence CACUAAAAUCAGUUACUAAUAUAUUUGUGUAUAAAUACAUGUGUGGUUUAAUUUAUUUUCAAUGUGUAUUUGUAUUCCAACAUGUAUUUUAUACUGGUGGUUGACUUUAGUGGCUGAUUUUGGUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ755628.1
ncRNA:24   AUGUGGUUUUAGUCGGUGAUUUCA   1
  ||||||||||||||||||||||||
targets:574   UACACCAAAAUCAGCCACUAAAGU   597

0.0 TSA: Arachis hypogaea CL1213Contig3.Arhy mRNA sequence NA coding protein psRNATarget
GAER01018153.1
ncRNA:24   AUGUGGUUUUAGUCGGUGAUUUCA   1
  *||*||||||||||||||||||*|
targets:90   GACCCCAAAAUCAGCCACUAAAAU   113

1.5 TSA: Arachis hypogaea Unigene18161 mRNA sequence NA coding protein psRNATarget