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BaseInfo

ncRNA ID novel_ahy_miR677
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:36959035-36959105 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 48 - UGGGACUGAAAUUUUUAGAGAUGG - 71
Stem-loop(if miRNA) --AC        -       AU    -  --A   C A
    CUCUAAAA UUUCAGU  UCCA GU   CCU C A
    |||||||| |||||||  |||| ||   ||| | A
    GAGAUUUU AAAGUCA  GGGU CA   GGA G U
GGUA        U       --    A  CAG   U A
Stem-loop sequence ACCUCUAAAAUUUCAGUAUUCCAGUACCUCCAAAUAGUAGGGACACAUGGGACUGAAAUUUUUAGAGAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR571617.1
ncRNA:24   GGUAGAGAUUUUUAAAGUCAGGGU   1
  *=||=||*||=|||||||||||||
targets:242   AUAUUUCCAAGAAUUUCAGUCCCA   265

2.0 TSA: Arachis hypogaea Ahy.Unigene33085 mRNA sequence NA coding protein psRNATarget
JR559484.1
ncRNA:24   GGUAGAGAUUUUUAAAGUCAGGGU   1
  *=||=||*||=|||||||||||||
targets:218   AUAUUUCCAAGAAUUUCAGUCCCA   241

2.0 TSA: Arachis hypogaea Ahy.Unigene19419 mRNA sequence NA coding protein psRNATarget
GAER01027146.1
ncRNA:24   GGUAGAGAUUUUUAAAGUCAGGGU   1
  *=||=||*||=|||||||||||||
targets:331   AUAUUUCCAAGAAUUUCAGUCCCA   354

2.0 TSA: Arachis hypogaea Unigene27163 mRNA sequence NA coding protein psRNATarget
EZ733438.1
ncRNA:24   GGUAGAGAUUUUUAAAGUCAGGGU   1
  ||||=*|*|||||||||||||||*
targets:77   CCAUUCCCAAAAAUUUCAGUCCCC   100

3.0 TSA: Arachis hypogaea CL1Contig12454.Arhy mRNA sequence NA coding protein psRNATarget
GAER01027225.1
ncRNA:24   GGUAGAGAUUUUUAAAGUCAGGGU   1
  ||||=*|*|||||||||||||||*
targets:149   CCAUUCCCAAAAAUUUCAGUCCCC   172

3.0 TSA: Arachis hypogaea Unigene27243 mRNA sequence NA coding protein psRNATarget