ncRNA ID | novel_ahy_miR672 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B05:9758216-9758407 [-] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UACACUGUAAACGAGAUAAGACUG - 24 |
Stem-loop(if miRNA) |
--C         A                          C  A   A         C   A            CAU   -ACA    G  -     CA    UCUUAUUUC UUUACAGUGUAAAUGAAAUAAUACUA AU UAU UCGUUUAUA UGU AAUGAGAUAAGG   GAG    AUAU GC UGUAU  C    ||||||||| |||||||||||||||||||||||||| || ||| ||||||||| ||| ||||||||||||   |||    |||| || |||||  G    AGAAUAGAG AAAUGUCACAUUUAUUUUAUUAUGAU UA AUA AGCAAAUGU ACA UUAUUCUAUUCU   CUC    UGUG UG ACAUG  U GUC         C                          A  C   A         A   C            ---   AAUG    A  C     UU |
Stem-loop sequence | CUCUUAUUUCAUUUACAGUGUAAAUGAAAUAAUACUACAUAUAUAUCGUUUAUACUGUAAAUGAGAUAAGGCAUGAGACAAUAUGGCUGUAUCACGUUUGUACACGUAGUGUGUAACUCUCUUAUCUUAUUCACAAUGUAAACGAAAUACAUAUAGUAUUAUUUUAUUUACACUGUAAACGAGAUAAGACUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01058827.1 |
|
1.0 | TSA: Arachis hypogaea Unigene58874 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR578749.1 |
|
1.5 | TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR574604.1 |
|
1.5 | TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR574604.1 |
|
1.5 | TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR578749.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence | NA | coding protein | psRNATarget |