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BaseInfo

ncRNA ID novel_ahy_miR671
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:16290110-16290187 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - CUAAAUAAGGUAAGUUAUGACUGU - 24
Stem-loop(if miRNA) --  C  A               A    C     UUAUC
  AG CA AAUUUGCCUUAUUUA UAUU AUUAA     G
  || || ||||||||||||||| |||| |||||
  UC GU UUGAAUGGAAUAAAU GUAA UAAUU     U
UG  A  A               C    A     UACAA
Stem-loop sequence AGCCAAAAUUUGCCUUAUUUAAUAUUCAUUAAUUAUCGUAACAUUUAAUAAAUGCUAAAUAAGGUAAGUUAUGACUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01043970.1
ncRNA:24   UGUCAGUAUUGAAUGGAAUAAAUC   1
  ||||||||||||||||||||||||
targets:466   ACAGUCAUAACUUACCUUAUUUAG   489

0.0 TSA: Arachis hypogaea Unigene44004 mRNA sequence NA coding protein psRNATarget
GAER01046787.1
ncRNA:24   UGUCAGUAUUGAAUGGAAUAAAUC   1
  |=||*||||||||=||||||||||
targets:103   AUAGCCAUAACUUGCCUUAUUUAG   126

1.5 TSA: Arachis hypogaea Unigene46822 mRNA sequence NA coding protein psRNATarget
EZ758621.1
ncRNA:24   UGUCAGUAUUGAAUGGAAUAAAUC   1
  ||||*||*|||||=||||||||||
targets:101   ACAGCCAGAACUUGCCUUAUUUAG   124

2.5 TSA: Arachis hypogaea CL18416Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR581577.1
ncRNA:24   UGUCAGUAUUGAAUGGAAUAAAUC   1
  |*|||||*|||||=||||||||||
targets:71   AAAGUCAGAACUUGCCUUAUUUAG   94

2.5 TSA: Arachis hypogaea Ahy.Unigene47457 mRNA sequence NA coding protein psRNATarget
EZ746717.1
ncRNA:24   UGUCAGUAUUGAAUGGAAUAAAUC   1
  |=|**||*|||||||=||||||||
targets:646   AUAAGCAAAACUUACUUUAUUUAG   669

2.5 TSA: Arachis hypogaea CL14873Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR582929.1
ncRNA:24   UGUCAGUAUUGAAUGGAAUAAAUC   1
  ||||**|*|||||||||||||||*
targets:49   ACAGCAAGAACUUACCUUAUUUAA   72

3.0 TSA: Arachis hypogaea Ahy.Unigene48809 mRNA sequence NA coding protein psRNATarget