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BaseInfo

ncRNA ID novel_ahy_miR665
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:102924097-102924271 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 152 - AUCAAUUAGGACUACUAGGUGUGU - 175
Stem-loop(if miRNA) --        -            A  AUAAC      A   A              A          AA  U        AGAGAACUUG
  ACAUCUAG AGUCUUAAUUGA UA     UUAAUA UAU AGUUUAUAAAAUUA AUCAAAUCAA  UC AAUUGAGG          A
  |||||||| |||||||||||| ||     |||||| ||| |||||||||||||| ||||||||||  || ||||||||          A
  UGUGGAUC UCAGGAUUAACU AU     AAUUAU AUA UCAAAUAUUUUAAU UAGUUUAGUU  AG UUAACUCU          A
UG        A            A  -----      A   A              C          GA  U        CAAAAGUUAC
Stem-loop sequence ACAUCUAGAGUCUUAAUUGAAUAAUAACUUAAUAAUAUAAGUUUAUAAAAUUAAAUCAAAUCAAAAUCUAAUUGAGGAGAGAACUUGAAACAUUGAAAACUCUCAAUUUGAAGUUGAUUUGAUCUAAUUUUAUAAACUAAUAAUAUUAAUAAUCAAUUAGGACUACUAGGUGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ745528.1
ncRNA:24   UGUGUGGAUCAUCAGGAUUAACUA   1
  |||=|||||||||||||||||*|*
targets:905   ACAUACCUAGUAGUCCUAAUUAAC   928

2.5 TSA: Arachis hypogaea CL7423Contig1.Arhy mRNA sequence NA coding protein psRNATarget