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BaseInfo

ncRNA ID novel_ahy_miR660
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:14845523-14845650 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 105 - AUGUUAGAGACUUAAAUAAGACGA - 128
Stem-loop(if miRNA) --   C         UC         C     C U      U     CC     --CAAU  C U
  GUC UAUUUAAGU  CUAACGUUU AAAAU G CUCAAU UUGUC  GCCGU      UC G U
  ||| |||||||||  ||||||||| ||||| | |||||| |||||  |||||      || |
  CAG AUAAAUUCA  GAUUGUAAA UUUUA C GAGUUA AAUAG  UGGCA      AG C A
AG   A         GA         A     A U      C     AA     AUCCUU  A A
Stem-loop sequence GUCCUAUUUAAGUUCCUAACGUUUCAAAAUCGUCUCAAUUUUGUCCCGCCGUCAAUUCCGUUAACAGAUUCCUAACGGUAAGAUAACAUUGAGUCAAUUUUAAAAUGUUAGAGACUUAAAUAAGACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR581961.1
ncRNA:24   AGCAGAAUAAAUUCAGAGAUUGUA   1
  |||||*||||||||||||||||=|
targets:183   UCGUCCUAUUUAAGUCUCUAACGU   206

2.5 TSA: Arachis hypogaea Ahy.Unigene47841 mRNA sequence NA coding protein psRNATarget