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BaseInfo

ncRNA ID	novel_ahy_miR653
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B01:5795217-5795389 [+]
Reference genome	Araip_v1.0
Source	SRR1323745
Length	24
Mature sequence(if miRNA)	1 - AACAAGUACAAGCUCCAGAGACAC - 24
Stem-loop(if miRNA)	--                    A  C         C                                C    GUUU      A  U   AACAAGUACAAGCUCCAGAG CA AAAAUCAAC AUUGAUACAUCAAUACAUUUAUUUAUUAUUUU UUUA    UAUAGA AA A   |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||| ||||    |||||| ||   UUGUUCAUGUUCGAGGUCUC GU UUUUAGUUG UAACUAUGUAGUUAUGUAAAUAAAUAAUAAAA AAAU    AUAUUU UU U UC                    C  A         A                                A    -AUU      A  U
Stem-loop sequence	AACAAGUACAAGCUCCAGAGACACAAAAUCAACCAUUGAUACAUCAAUACAUUUAUUUAUUAUUUUCUUUAGUUUUAUAGAAAAUAUUUUAUUUAUAUUAUAAAAAAAAUAAUAAAUAAAUGUAUUGAUGUAUCAAUAGUUGAUUUUAUGCCUCUGGAGCUUGUACUUGUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01013270.1	ncRNA:24   CACAGAGACCUCGAACAUGAACAA   1   |||*||||||||||||||=||||| targets:10   GUGCCUCUGGAGCUUGUAUUUGUU   33 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene13278 mRNA sequence	NA	coding protein	psRNATarget
GAER01013928.1	ncRNA:24   CACAGAGACCUCGAACAUGAACAA   1   |||*||=||*|||||||||||||| targets:24   GUGCCUUUGAAGCUUGUACUUGUU   47 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene13936 mRNA sequence	NA	coding protein	psRNATarget
GAER01058094.1	ncRNA:24   CACAGAGACCUCGAACAUGAACAA   1   |||*||=||*|||||||||||||| targets:24   GUGCCUUUGAAGCUUGUACUUGUU   47 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene58141 mRNA sequence	NA	coding protein	psRNATarget
JR542043.1	ncRNA:24   CACA--GAGACCUCGAACAUGAACAA   1   *|||--|||**||||||||||||||| targets:982   AUGUUGCUCCUGAGCUUGUACUUGUU   1007 Target Full Sequence	2.0	TSA: Arachis hypogaea Ahy.Unigene1376 mRNA sequence	NA	coding protein	psRNATarget
GAER01036431.1	ncRNA:24   CACA--GAGACCUCGAACAUGAACAA   1   *|||--|||**||||||||||||||| targets:1166   AUGUUGCUCCUGAGCUUGUACUUGUU   1191 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene36455 mRNA sequence	NA	coding protein	psRNATarget
GAER01037895.1	ncRNA:24   CACA--GAGACCUCGAACAUGAACAA   1   *|||--|||**||||||||||||||| targets:1174   AUGUUGCUCCUGAGCUUGUACUUGUU   1199 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene37921 mRNA sequence	NA	coding protein	psRNATarget
GAER01034082.1	ncRNA:24   CACAGAGACCUCGAACAUGAACAA   1   ***|||=||||||||||*|||||| targets:156   UCUUCUUUGGAGCUUGUUCUUGUU   179 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene34105 mRNA sequence	NA	coding protein	psRNATarget
JR574777.1	ncRNA:24   CACA--GAGACCUCGAACAUGAACAA   1   *|||--||||*||*|||||||||||| targets:114   AUGUUCCUCUAGACCUUGUACUUGUU   139 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene37814 mRNA sequence	NA	coding protein	psRNATarget
JR574777.1	ncRNA:24   CACA--GAGACCUCGAACAUGAACAA   1   *|||--||||*||*|||||||||||| targets:141   AUGUUCCUCUAGACCUUGUACUUGUU   166 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene37814 mRNA sequence	NA	coding protein	psRNATarget
JR582458.1	ncRNA:24   CACA--GAGACCUCGAACAUGAACAA   1   *|||--||||*||*|||||||||||| targets:13   AUGUUCCUCUAGACCUUGUACUUGUU   38 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene48338 mRNA sequence	NA	coding protein	psRNATarget
GAER01052914.1	ncRNA:24   CACA--GAGACCUCGAACAUGAACAA   1   *|||--||||*||*|||||||||||| targets:246   AUGUUCCUCUAGACCUUGUACUUGUU   271 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene52953 mRNA sequence	NA	coding protein	psRNATarget