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BaseInfo

ncRNA ID novel_ahy_miR650
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:138824012-138824172 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UACAAACUCUAGAGGCACAAAAUC - 24
Stem-loop(if miRNA) --     A                                                      UC   -UAA    AAUAAA
  UACAA CUCUAGAGGCACAAAAUCAACCGUUGAUGCAUCAAUAUAUUUAUUUAUUAUUUU  UUA    UAUA      A
  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    ||||
  AUGUU GAGGUCUCCGUGUUUUAGUUGGCAACUACGUAGUUAUGUAAAUAAAUAGUAAGA  AAU    AUAU      U
UC     C                                                      GA   UAAG    CUUUUA
Stem-loop sequence UACAAACUCUAGAGGCACAAAAUCAACCGUUGAUGCAUCAAUAUAUUUAUUUAUUAUUUUUCUUAUAAUAUAAAUAAAAUAUUUUCUAUAGAAUUAAAGAGAAUGAUAAAUAAAUGUAUUGAUGCAUCAACGGUUGAUUUUGUGCCUCUGGAGCUUGUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR547939.1
ncRNA:24   CUAAAACACGGAGAUCUCAAACAU   1
  *|||*|||||||||*|||||||||
targets:1133   AAUUCUGUGCCUCUCGAGUUUGUA   1156

1.5 TSA: Arachis hypogaea Ahy.Unigene7469 mRNA sequence NA coding protein psRNATarget