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BaseInfo

ncRNA ID	ath-miRf10381-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - CACUCGACCCCCUGGUCGAGUA - NA
Stem-loop(if miRNA)	AC           CCA     U   - AUCCA  A  -----  ACUUGACCCCCAGGUCGAGUGACUUUG GAAG  AUACUCGACCA   GGUCG GUG C     GC CC     AU                           G ||||  |||||||||||   ||||| ||| |     || ||     || CUUC  UAUGAGCUGGU   CCAGC CAC G     GU AG     CG                           A     AC           CCC     U   C ---CA  -  CUCAC  GACUCGACUCAUCUACCCUUCUUACCG
Stem-loop sequence	GAAGACAUACUCGACCACCAGGUCGUGUGCAUCCAGCACCAUACUUGACCCCCAGGUCGAGUGACUUUGGAGCCAUUCUUCCCAUCUACUCAGCUCAGGCCACUCGAUGACGCCACUCGACCCCCUGGUCGAGUAUCACUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183311.1	ncRNA:22   AUGAGCUGGUCCCCCAGCUCAC   1   |||||||||||||||||||||| targets:436   UACUCGACCAGGGGGUCGAGUG   457 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:22   AUGAGCUGGUCCCCCAGCUCAC   1   *|||||||||*||||||||||| targets:1924   CACUCGACCACGGGGUCGAGUG   1945 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
Y11156.1	ncRNA:22   AUGAGCUGGUCCCCCAGCUCAC   1   ****=||*|||||||||||||| targets:133   GUGAUGAACAGGGGGUCGAGUG   154 Target Full Sequence	3.0	A.thaliana mRNA for hypothetical protein, partial (2019 bp)	NA	coding protein	psRNATarget
NM_001341078.1	ncRNA:22   AUGAGCUGGUCCCCCAGCUCAC   1   ****=||*|||||||||||||| targets:2104   GUGAUGAACAGGGGGUCGAGUG   2125 Target Full Sequence	3.0	Arabidopsis thaliana binding protein mRNA	binding protein(AT4G15890)	coding protein	psRNATarget
NM_117681.3	ncRNA:22   AUGAGCUGGUCCCCCAGCUCAC   1   ****=||*|||||||||||||| targets:2209   GUGAUGAACAGGGGGUCGAGUG   2230 Target Full Sequence	3.0	Arabidopsis thaliana binding protein mRNA	binding protein(AT4G15890)	coding protein	psRNATarget