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BaseInfo

ncRNA ID novel_ahy_miR644
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:124767240-124767332 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 70 - AUAAAAUUAAAGUAGAAAAGGACG - 93
Stem-loop(if miRNA) --               -      AA      --             A
  UUCUUUUUUAUUUUA UUUUAU  UUUUAU  AAUUAUUUUUAUU U
  ||||||||||||||| ||||||  ||||||  |||||||||||||
  AGGAAAAGAUGAAAU AAAAUA  AAAAUG  UUAAUGGGAAUAA U
GC               U      AA      GU             U
Stem-loop sequence UUCUUUUUUAUUUUAUUUUAUAAUUUUAUAAUUAUUUUUAUUAUUUAAUAAGGGUAAUUUGGUAAAAAAAUAAAAUUAAAGUAGAAAAGGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ745419.1
ncRNA:24   GCAGGAAAAGAUGAAAUUAAAAUA   1
  =*|==|||||*||||||||||||*
targets:276   UUUUUUUUUCCACUUUAAUUUUAC   299

2.0 TSA: Arachis hypogaea CL6796Contig1.Arhy mRNA sequence NA coding protein psRNATarget