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BaseInfo

ncRNA ID novel_ahy_miR642
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:5568007-5568091 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - UCCAGUUAUUUUAAUCGUUGA - 21
Stem-loop(if miRNA) --UC     A              CUG     UAAAAA       
    CAGUU UUUUAAUCGUUGAU   AAUUA      AUAUAUAU
    ||||| ||||||||||||||   |||||      |||||||A
    GUCAA AAAAUUGGCAACUA   UUAAU      UAUAUAUA
CAAA     C              AAA     ------       
Stem-loop sequence UCCAGUUAUUUUAAUCGUUGAUCUGAAUUAUAAAAAAUAUAUAUAAUAUAUAUUAAUUAAAAUCAACGGUUAAAACAACUGAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01009127.1
ncRNA:21   AGUUGCUAAUUUUAUUGACCU   1
  |=||||||||||||*||||||
targets:4   UUAACGAUUAAAAUUACUGGA   24

1.5 TSA: Arachis hypogaea Unigene9134 mRNA sequence NA coding protein psRNATarget
GAER01046856.1
ncRNA:21   AGUUGCUAAUUUUAUUGACCU   1
  ||||*|||||||||||||*||
targets:292   UCAAAGAUUAAAAUAACUAGA   312

2.5 TSA: Arachis hypogaea Unigene46891 mRNA sequence NA coding protein psRNATarget