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BaseInfo

ncRNA ID novel_ahy_miR638
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:26398491-26398568 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - UGAGCCAAGGAUGGCUUGCCG - 21
Stem-loop(if miRNA) --          A          ------    CAU U   AC
  UGAGCCAAGG UGGCUUGCCG      GUGA   C CCC  U
  |||||||||| ||||||||||      ||||   | |||
  ACUUGGUUCC AUCGAGCGGC      UACU   G GGG  U
GU          G          GUUGAC    --U U   AU
Stem-loop sequence UGAGCCAAGGAUGGCUUGCCGGUGACAUCUCCCACUUUAGGGUGUUCAUCAGUUGCGGCGAGCUAGCCUUGGUUCAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR568017.1
ncRNA:21   GCCGUUCGGUAGGAACCGAGU   1
  *|||||*||||||||||||||
targets:1300   AGGCAAUCCAUCCUUGGCUCA   1320

1.0 TSA: Arachis hypogaea Ahy.Unigene28269 mRNA sequence NA coding protein psRNATarget
GAER01020620.1
ncRNA:21   GCCGUUCGGUAGGAACCGAGU   1
  *|||||*||||||||||||||
targets:1518   AGGCAAUCCAUCCUUGGCUCA   1538

1.0 TSA: Arachis hypogaea Unigene20630 mRNA sequence NA coding protein psRNATarget
GAER01030772.1
ncRNA:21   GCCGUUCGGUAGGAACCGAGU   1
  =||*|||=|||||||||||||
targets:1159   UGGGAAGUCAUCCUUGGCUCA   1179

2.0 TSA: Arachis hypogaea Unigene30793 mRNA sequence NA coding protein psRNATarget
EZ735497.1
ncRNA:21   GCCGUUCGGUAGGAACCGAGU   1
  |||||=|||||||||||*|||
targets:815   CGGCAGGCCAUCCUUGGAUCA   835

2.5 TSA: Arachis hypogaea CL1Contig14513.Arhy mRNA sequence NA coding protein psRNATarget
EZ737286.1
ncRNA:21   GCCGUUCGGUAGGAACCGAGU   1
  *|||||*=||||||||||||*
targets:498   AGGCAAAUCAUCCUUGGCUCU   518

3.0 TSA: Arachis hypogaea CL4146Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR553579.1
ncRNA:21   GCCGUUCGGUAGGAACCGAGU   1
  *|||||*=||||||||||||*
targets:839   AGGCAAAUCAUCCUUGGCUCU   859

3.0 TSA: Arachis hypogaea Ahy.Unigene13318 mRNA sequence NA coding protein psRNATarget