ncRNA ID | ath-miRf10380-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - ACCCGACCUCGGGGUCGAGUGGU - NA |
Stem-loop(if miRNA) |
  G   A          G       A  -     ---GA    GUA CUCUCGUGGUGGUACUCGGCCAGGGGUCGAGUGAUGAGAUGA GU AAG CACUCGACCU GGGGUCG GU GAAGU     UCGA   U                                          A || ||| |||||||||| ||||||| || |||||     ||||   |                                          A CA UUU GUGAGCUGGG CUCCAGC CA CUUCG     CCGG   A                                          U   G   G          G       C  U     AAGUU    --- GUUGUCUGGUGAGCUGGGGGACCAACUCAUCCCCUGAAGAGC |
Stem-loop sequence | GUGAAGACACUCGACCUGGGGGUCGAGUGAAGUGAUCGAGUAUCUCUCGUGGUGGUACUCGGCCAGGGGUCGAGUGAUGAGAUGAAAUCGAGAAGUCCCCUACUCAACCAGGGGGUCGAGUGGUCUGUUGAGGCCUUGAAGCUUCUACCCGACCUCGGGGUCGAGUGGUUUGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY227642.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EF183042.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget |