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BaseInfo

ncRNA ID novel_ahy_miR627
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:13444974-13445043 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UUUAUACUGUAAACGAGAUAAGGC - 24
Stem-loop(if miRNA) --        A      U       A     A  U
  CUUAUCUC UUUAUA UAUAAAC AGAUA GU U
  |||||||| |||||| ||||||| ||||| ||
  GAAUAGAG AAAUGU AUAUUUG UUUAU CA G
CG        C      C       C     A  C
Stem-loop sequence CUUAUCUCAUUUAUAUUAUAAACAAGAUAAGUUUGCACAUAUUUCGUUUAUACUGUAAACGAGAUAAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   CG-GAAUAGAGCAAAUGUCAUAUUU   1
  ||-|*|||||||||||||||=||||
targets:79   GCACGUAUCUCGUUUACAGUGUAAA   103

1.5 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   CGGAAUAGAGCAAAUGUCAUAUUU   1
  *|||||||||*||||||||=||||
targets:45   ACCUUAUCUCAUUUACAGUGUAAA   68

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   CGGAAUAGAGCAAAUGUCAUAUUU   1
  |*=|||||||*||||||||=||||
targets:23   GGUUUAUCUCAUUUACAGUGUAAA   46

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   CGGAAUAGAGCAAAUGUCAUAUUU   1
  |||*||||||*||||||*||||||
targets:60   GCCGUAUCUCAUUUACACUAUAAA   83

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget