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BaseInfo

ncRNA ID novel_ahy_miR623
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:64687842-64688001 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 137 - ACAAAGGCAAGGAAGGGACAUAGA - 160
Stem-loop(if miRNA) ACAA     A   A           GA  UAAAGCACUUCAUAAGAUCUUCAAGAGGAAGAACAAGCCGCCAUCACUAAG
    AGGCA GGA GGGACAUAGAG  GC                                                   G
    ||||| ||| |||||||||||  ||
    UUUGU UCU UCUUGUAUUUC  GU                                                   U
GAUG     A   A           --  AUUAAAAACUUUUUGUCUUUUUGUCCUCGUUCCUUUAAUUUUUUGCCCAGG
Stem-loop sequence ACAAAGGCAAGGAAGGGACAUAGAGGAGCUAAAGCACUUCAUAAGAUCUUCAAGAGGAAGAACAAGCCGCCAUCACUAAGGUGGACCCGUUUUUUAAUUUCCUUGCUCCUGUUUUUCUGUUUUUCAAAAAUUAUGCUUUAUGUUCUAUCUAUGUUUGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ738487.1
ncRNA:24   AGAUACAGGGAAGGAACGGAAACA   1
  |=||||||=|||||||||||||||
targets:488   UUUAUGUCUCUUCCUUGCCUUUGU   511

1.0 TSA: Arachis hypogaea CL10856Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ722693.1
ncRNA:24   AGAUACAGGGAAGGAACGGAAACA   1
  ||*|||||=|||||||||||||||
targets:457   UCAAUGUCUCUUCCUUGCCUUUGU   480

1.0 TSA: Arachis hypogaea CL1Contig1709.Arhy mRNA sequence NA coding protein psRNATarget
EZ733643.1
ncRNA:24   AGAUACAGGGAAGGAACGGAAACA   1
  ||*|||||=|||||||||||||||
targets:129   UCAAUGUCUCUUCCUUGCCUUUGU   152

1.0 TSA: Arachis hypogaea CL1Contig12659.Arhy mRNA sequence NA coding protein psRNATarget
EZ744562.1
ncRNA:24   AGAUACAGGGAAGGAACGGAAACA   1
  ||||||||=||||||||||||||*
targets:447   UCUAUGUCUCUUCCUUGCCUUUGC   470

2.0 TSA: Arachis hypogaea CL2578Contig2.Arhy mRNA sequence NA coding protein psRNATarget