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BaseInfo

ncRNA ID novel_ahy_miR618
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:109268509-109268589 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - ACUGAAAUUUUAGAGACAAAGACA - 24
Stem-loop(if miRNA) --   C           A       -CUC    GU -  UAC
  UCU UGUCUUUAAAA UUUUAGU    CAGU  C CC   U
  ||| ||||||||||| |||||||    ||||  | ||
  AGA ACAGAGAUUUU AAAGUCA    GUCA  G GG   U
AC   A           -       UAAA    UG A  UUU
Stem-loop sequence UCUCUGUCUUUAAAAAUUUUAGUCUCCAGUGUCCCUACUUUUUGGAGGUACUGAAAUACUGAAAUUUUAGAGACAAAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ728221.1
ncRNA:24   ACAGAAACAGAGAUUUUAAAGUCA   1
  |||||*||||||||||||||||||
targets:232   UGUCUCUGUCUCUAAAAUUUCAGU   255

1.0 TSA: Arachis hypogaea CL1Contig7237.Arhy mRNA sequence NA coding protein psRNATarget
GAER01022094.1
ncRNA:24   ACAGAAACAGAGAUUUUAAAGUCA   1
  *||||*||||||||||||||||||
targets:347   AGUCUAUGUCUCUAAAAUUUCAGU   370

1.0 TSA: Arachis hypogaea Unigene22105 mRNA sequence NA coding protein psRNATarget
JR573198.1
ncRNA:24   ACAGAAACAGAGAUUUUAAAGUCA   1
  *||||*||||||||||||||||||
targets:164   AGUCUAUGUCUCUAAAAUUUCAGU   187

1.0 TSA: Arachis hypogaea Ahy.Unigene35840 mRNA sequence NA coding protein psRNATarget