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BaseInfo

ncRNA ID novel_ahy_miR617
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:111461320-111461382 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 40 - UUACACUGUAAACGAGAUAUGGCA - 63
Stem-loop(if miRNA) --               G     G   AAAAU
  UUACACUGUAAACGA AUAUG CAC     G
  ||||||||||||||| ||||| |||
  AAUGUGACAUUUGUU UAUAU GUG     U
CA               G     -   CAGUU
Stem-loop sequence UUACACUGUAAACGAGAUAUGGCACAAAAUGUUUGACGUGUAUAUGUUGUUUACAGUGUAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   ACG-GUAUAGAGCAAAUGUCACAUU   1
  |||-|=|||||||||||||||||||
targets:78   UGCACGUAUCUCGUUUACAGUGUAA   102

0.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   ACGGUAUAGAGCAAAUGUCACAUU   1
  **||*||||||*||||||||||||
targets:44   AACCUUAUCUCAUUUACAGUGUAA   67

1.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   ACGGUAUAGAGCAAAUGUCACAUU   1
  ||*=*||||||*||||||||||||
targets:22   UGGUUUAUCUCAUUUACAGUGUAA   45

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   ACGGUAUAGAGCAAAUGUCACAUU   1
  ||||*|||*|||||||=|||||||
targets:146   UGCCUUAUGUCGUUUAUAGUGUAA   169

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget