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BaseInfo

ncRNA ID novel_ahy_miR616
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:134821923-134822005 [-]
Reference genome Araip_v1.0
Source SRR1323745;SRR2922380;SRR2922381
Length 22
Mature sequence(if miRNA) 1 - UUUCAUUCCAUACAUCAUCUAU - 22
Stem-loop(if miRNA) --   -                  U      GG   UUUC  U
  AGA GGUGUAUGGAAUGAGAAA GGGAAG  CGU    GG U
  ||| |||||||||||||||||| ||||||  |||    ||
  UCU CUACAUACCUUACUUUUU CCCUUC  GUA    UC G
UA   A                  C      AA   --CU  A
Stem-loop sequence AGAGGUGUAUGGAAUGAGAAAUGGGAAGGGCGUUUUCGGUUGACUUCAUGAACUUCCCCUUUUUCAUUCCAUACAUCAUCUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01041410.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  ||||||||||||||||||||||
targets:507   AUAGAUGAUGUAUGGAAUGAAA   528

0.0 TSA: Arachis hypogaea Unigene41441 mRNA sequence NA coding protein psRNATarget
GAER01033012.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  ||||||||||||||||||||||
targets:87   AUAGAUGAUGUAUGGAAUGAAA   108

0.0 TSA: Arachis hypogaea Unigene33034 mRNA sequence NA coding protein psRNATarget
JR577059.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  *|=|||||*||||||||||||=
targets:161   UUGGAUGACGUAUGGAAUGAAG   182

2.0 TSA: Arachis hypogaea Ahy.Unigene40096 mRNA sequence NA coding protein psRNATarget
EZ751157.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  *|=|||||*||||||||||||=
targets:82   UUGGAUGACGUAUGGAAUGAAG   103

2.0 TSA: Arachis hypogaea CL18806Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GF100596.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  *|=|||||*||||||||||||=
targets:82   UUGGAUGACGUAUGGAAUGAAG   103

2.0 RGC71 Peanut Unigenes Arachis hypogaea STS cDNA clone 0_3866, sequence tagged site NA coding protein psRNATarget
JR588150.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  *|=||*|||||=||||||||||
targets:120   UUGGACGAUGUGUGGAAUGAAA   141

2.5 TSA: Arachis hypogaea Ahy.Unigene56578 mRNA sequence NA coding protein psRNATarget
JR546138.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  *||||*|||||*||||||||||
targets:9   UUAGACGAUGUUUGGAAUGAAA   30

2.5 TSA: Arachis hypogaea Ahy.Unigene5580 mRNA sequence NA coding protein psRNATarget
JR553857.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  ||-|||||||||||*||||||=
targets:87   AU-GAUGAUGUAUGAAAUGAAG   107

2.5 TSA: Arachis hypogaea Ahy.Unigene13605 mRNA sequence NA coding protein psRNATarget
GAER01023351.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  ||-|||||||||||*||||||=
targets:85   AU-GAUGAUGUAUGAAAUGAAG   105

2.5 TSA: Arachis hypogaea Unigene23362 mRNA sequence NA coding protein psRNATarget
JR545131.1
ncRNA:22   UAUCUACUACAUACCUUACUUU   1
  |*|||*||||*|||||||||||
targets:169   AGAGAGGAUGGAUGGAAUGAAA   190

2.5 TSA: Arachis hypogaea Ahy.Unigene4535 mRNA sequence NA coding protein psRNATarget