Search result

BaseInfo

ncRNA ID novel_ahy_miR615
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:124382869-124383063 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 172 - AUAAUCUGGAGAACAAGUACAAGA - 195
Stem-loop(if miRNA) --                       A                    C      A                              -UAA    AAUAAA
  AUAAUCUGGAGAACAAGUACAAG UCCAGAGGCAUAAAAUCAAC AUUGAU CAUCAAUACAUUUAUUUAUUAUUUUUUUUA    UAUA      A
  ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    ||||
  UAUUAGACCUCUUGUUCAUGUUC AGGUCUCCGUGUUUUAGUUG UAAUUA GUAGUUAUGUAAAUAAAUAGUAAAAGAAAU    AUAU      U
GC                       G                    A      C                              CAAA    CUUUUA
Stem-loop sequence AUAAUCUGGAGAACAAGUACAAGAUCCAGAGGCAUAAAAUCAACCAUUGAUACAUCAAUACAUUUAUUUAUUAUUUUUUUUAUAAUAUAAAUAAAAUAUUUUCUAUAAAACUAAAGAAAAUGAUAAAUAAAUGUAUUGAUGCAUUAAUAGUUGAUUUUGUGCCUCUGGAGCUUGUACUUGUUCUCCAGAUUAUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01013270.1
ncRNA:24   AGAACAUGAACAAGAGGUCUAAUA   1
  *||||||=||||||||||||||||
targets:21   GCUUGUAUUUGUUCUCCAGAUUAU   44

1.0 TSA: Arachis hypogaea Unigene13278 mRNA sequence NA coding protein psRNATarget