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BaseInfo

ncRNA ID novel_ahy_miR611
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:133006439-133006533 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 75 - AACCCUCAAAGGCUUCCAUUC - 95
Stem-loop(if miRNA) --A    UC                UG        AUUCCAUUA   A
   ACCC  AAAGGCUUCCAUUCUU  UAUGUUCA         UUC A
   ||||  ||||||||||||||||  ||||||||         ||| U
   UGGG  UUUCCGAGGGUAAGAA  AUACAAGU         AAG U
UGC    UU                --        AAAAAAGAA   U
Stem-loop sequence AACCCUCAAAGGCUUCCAUUCUUUGUAUGUUCAAUUCCAUUAUUCAAUUUGAAAAGAAAAAAUGAACAUAAAGAAUGGGAGCCUUUUUGGGUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ721288.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:546   UGAUGGGAGCCGUUGAGGGUU   566

2.5 TSA: Arachis hypogaea CL1Contig304.Arhy mRNA sequence NA coding protein psRNATarget
EZ723829.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:554   UGAUGGGAGCCGUUGAGGGUU   574

2.5 TSA: Arachis hypogaea CL1Contig2845.Arhy mRNA sequence NA coding protein psRNATarget
GAER01035568.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:1181   UGAUGGGAGCCGUUGAGGGUU   1201

2.5 TSA: Arachis hypogaea Unigene35591 mRNA sequence NA coding protein psRNATarget