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BaseInfo

ncRNA ID novel_ahy_miR606
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:106037276-106037476 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AAAGGAAGAAGGGACAAAAGUACA - 24
Stem-loop(if miRNA) --A                    A  G             UA                                                          
   AAGGAAGAAGGGACAAAAGU CA CUGAAAGUUUAUA  CUGGACACGAUUACACUACAAUCAUUUAAUGAGUCACGCAUGCACACCAUUUAUAUACC
   |||||||||||||||||||| || |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||G
   UUCCUUCUUCCCUGUUUUCA GU GACUUUCAAGUAU  GACCUGUGUUAAUGUGAUGUUAGUAAAUUACUCAGUGCGUACGUGUGGUAAAUAUAUGA
AGA                    G  G             GC                                                          
Stem-loop sequence AAAGGAAGAAGGGACAAAAGUACAGCUGAAAGUUUAUAUACUGGACACGAUUACACUACAAUCAUUUAAUGAGUCACGCAUGCACACCAUUUAUAUACCGAGUAUAUAAAUGGUGUGCAUGCGUGACUCAUUAAAUGAUUGUAGUGUAAUUGUGUCCAGCGUAUGAACUUUCAGGUGGACUUUUGUCCCUUCUUCCUUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01057938.1
ncRNA:24   ACAUGAAAACAGGGAAGAAGGAAA   1
  |||=-|||*||||=||||||||||
targets:1178   UGUG-UUUGGUCCUUUCUUCCUUU   1200

2.5 TSA: Arachis hypogaea Unigene57984 mRNA sequence NA coding protein psRNATarget
JR545575.1
ncRNA:24   ACAUGAAAACAGGGAAGAAGGAAA   1
  |||=-|||*||||=||||||||||
targets:1224   UGUG-UUUGGUCCUUUCUUCCUUU   1246

2.5 TSA: Arachis hypogaea Ahy.Unigene4992 mRNA sequence NA coding protein psRNATarget
GAER01027990.1
ncRNA:24   ACAUGAAAACAGGGAAGAAGGAAA   1
  |**|=|||||||*||||||||||*
targets:84   UCCAUUUUUGUCACUUCUUCCUUC   107

2.5 TSA: Arachis hypogaea Unigene28008 mRNA sequence NA coding protein psRNATarget