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BaseInfo

ncRNA ID ath-miRf10377-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGGCGACGGUGGUGAGGACG - NA
Stem-loop(if miRNA)     -    -      CU      C      -AG  U
ACUA CCGU GUCCUC  CCACCG CGCCGG   AG U
|||| |||| ||||||  |||||| ||||||   ||
UGAU GGCA CAGGAG  GGUGGC GCGGUC   UC U
    U    G      -U      A      GAG  A
Stem-loop sequence ACUACCGUGUCCUCCUCCACCGCCGCCGGAGAGUUUACUGAGCUGGCGACGGUGGUGAGGACGACGGUUAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_106461.4
ncRNA:20   GCAGGAGUGGUGGCAGCGGU   1
  ||||||||||||||||||||
targets:400   CGUCCUCACCACCGUCGCCA   419

0.0 Arabidopsis thaliana nucleolar GTP-binding protein mRNA nucleolar GTP-binding protein(AT1G78110) coding protein psRNATarget
AK230238.1
ncRNA:20   GCAGGAGUGGUGGCAGCGGU   1
  ||||||||||||||||||||
targets:203   CGUCCUCACCACCGUCGCCA   222

0.0 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-09-A04 NA coding protein psRNATarget
BX815730.1
ncRNA:20   GCAGGAGUGGUGGCAGCGGU   1
  ||||||||||||||||||||
targets:194   CGUCCUCACCACCGUCGCCA   213

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BT015806.1
ncRNA:20   GCAGGAGUGGUGGCAGCGGU   1
  ||||||||||||||||||||
targets:190   CGUCCUCACCACCGUCGCCA   209

0.0 Arabidopsis thaliana At1g78110 gene, complete cds NA coding protein psRNATarget
BT020193.1
ncRNA:20   GCAGGAGUGGUGGCAGCGGU   1
  ||||||||||||||||||||
targets:151   CGUCCUCACCACCGUCGCCA   170

0.0 Arabidopsis thaliana At1g78110 mRNA, complete cds NA coding protein psRNATarget
NM_121237.2
ncRNA:20   GCAGGAGUGGUGGCAGCGGU   1
  |*||*|||||||||||||||
targets:524   CAUCGUCACCACCGUCGCCA   543

2.0 Arabidopsis thaliana proline-rich family protein mRNA proline-rich family protein(AT5G11990) coding protein psRNATarget