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BaseInfo

ncRNA ID novel_ahy_miR604
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:98029950-98030053 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - ACUGGAUUGAAGAGAGAAACCGGU - 24
Stem-loop(if miRNA) --     A   AA   A        -------       -           AAAUA
  ACUGG UUG  GAG GAAACCGG       UUCUAAA CCGGUUUAAAA     A
  ||||| |||  ||| ||||||||       ||||||| |||||||||||     A
  UGACC AAC  UUC UUUUGGCC       AAGAUUU GGCCAAAUUUU     A
UU     A   -A   A        UAAAUUU       U           AGCCA
Stem-loop sequence ACUGGAUUGAAGAGAGAAACCGGUUCUAAACCGGUUUAAAAAAAUAAAAACCGAUUUUAAACCGGUUUUAGAAUUUAAAUCCGGUUUUACUUACAAACCAGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000661.1
ncRNA:24   UGGCCAAAGAGAGAAGUUAGGUCA   1
  ||||||||||||||||||||||||
targets:95   ACCGGUUUCUCUCUUCAAUCCAGU   118

0.0 TSA: Arachis hypogaea Unigene662 mRNA sequence NA coding protein psRNATarget
GAER01048812.1
ncRNA:24   UGGCCAAAGAGAGAAGUUAGGUCA   1
  ||||*|||=*||||||||||||||
targets:109   ACCGAUUUUGCUCUUCAAUCCAGU   132

2.0 TSA: Arachis hypogaea Unigene48849 mRNA sequence NA coding protein psRNATarget
EZ746410.1
ncRNA:24   UGGCCAAAGAGAGAAGUUAGGUCA   1
  |=|--|||||||*||||||||||*
targets:161   AUC--UUUCUCUAUUCAAUCCAGG   182

2.5 TSA: Arachis hypogaea CL12732Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR542099.1
ncRNA:24   UGGCCAAAGAGAGAAGUUAGGUCA   1
  |=|--|||||||*||||||||||*
targets:495   AUC--UUUCUCUAUUCAAUCCAGG   516

2.5 TSA: Arachis hypogaea Ahy.Unigene1433 mRNA sequence NA coding protein psRNATarget