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BaseInfo

ncRNA ID novel_ahy_miR597
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:28796368-28796500 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 110 - ACAUUAGGGACUUAAAUAAGACGA - 133
Stem-loop(if miRNA) --AA C                    C     C U      U      -CA  GUCACU  UGUUAACA
    C UAUUUAAGUCCCUAAUGUUU AAAAU G CUCAAU UUGUCC   CC      UC        G
    | |||||||||||||||||||| ||||| | |||||| ||||||   ||      ||
    G AUAAAUUCAGGGAUUACAAA UUUUA C GAGUUA AAUAGG   GG      GG        A
AGCA A                    A     A C      C      ACC  ----AC  CAAUCCCU
Stem-loop sequence AACCUAUUUAAGUCCCUAAUGUUUCAAAAUCGUCUCAAUUUUGUCCCACCGUCACUUCUGUUAACAGAUCCCUAACGGCAGGCCAGGAUAACAUUGAGCCAAUUUUAAAACAUUAGGGACUUAAAUAAGACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01050950.1
ncRNA:24   AGCAGAAUAAAUUCAGGGAUUACA   1
  |||||*|||||||||||||||*||
targets:532   UCGUCCUAUUUAAGUCCCUAACGU   555

2.5 TSA: Arachis hypogaea Unigene50988 mRNA sequence NA coding protein psRNATarget
GAER01050818.1
ncRNA:24   AGCAGAAUAAAUUCAGGGAUUACA   1
  |||||*|||||||||||||||*||
targets:221   UCGUCCUAUUUAAGUCCCUAACGU   244

2.5 TSA: Arachis hypogaea Unigene50856 mRNA sequence NA coding protein psRNATarget
JR588190.1
ncRNA:24   AGCAGAAUAAAUUCAGGGAUUACA   1
  |||||*|||||||||||||||*||
targets:109   UCGUCCUAUUUAAGUCCCUAACGU   132

2.5 TSA: Arachis hypogaea Ahy.Unigene56618 mRNA sequence NA coding protein psRNATarget