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BaseInfo

ncRNA ID	novel_ahy_miR593
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B03:3388175-3388318 [-]
Reference genome	Araip_v1.0
Source	SRR1323745
Length	24
Mature sequence(if miRNA)	121 - GUGGAAACUCAGGUGUAGUCGACU - 144
Stem-loop(if miRNA)	--            G         C      UG     A   A        CCC         ---    -  UG   GUGGAAACUCAG UGUAGUCGA UUCACG  AAGUU AUA CUGAGAGC   GUUAGAUGA   UUUA UC  A   |||||||||||| ||||||||| ||||||  ||||| ||| ||||||||   |||||||||   |||| ||   CACUUUUGAGUC ACGUCAGCU AAGUGC  UUCAA UAU GACUCUUG   UAAUCUACU   AAAU AG  U AC            G         U      CU     C   C        --A         UUU    C  UU
Stem-loop sequence	GUGGAAACUCAGGUGUAGUCGACUUCACGUGAAGUUAAUAACUGAGAGCCCCGUUAGAUGAUUUAUCUGAUUUGACUAAAUUUUCAUCUAAUAGUUCUCAGCUAUCAACUUUCCGUGAAUUCGACUGCAGCUGAGUUUUCACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JR559052.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   ||||||||=||||||||||||||| targets:78   AGUCGACUGCACCUGAGUUUCCAC   101 Target Full Sequence	1.0	TSA: Arachis hypogaea Ahy.Unigene18963 mRNA sequence	NA	coding protein	psRNATarget
JR573232.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   **||*|||*||||||||||||||| targets:230   UAUCAACUUCACCUGAGUUUCCAC   253 Target Full Sequence	1.0	TSA: Arachis hypogaea Ahy.Unigene35916 mRNA sequence	NA	coding protein	psRNATarget
GAER01029715.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   **||*|||*||||||||||||||| targets:1172   UAUCAACUUCACCUGAGUUUCCAC   1195 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene29735 mRNA sequence	NA	coding protein	psRNATarget
EZ731737.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   ||||||||||||=||||||||||| targets:205   AGUCGACUACACUUGAGUUUCCAC   228 Target Full Sequence	1.5	TSA: Arachis hypogaea CL1Contig10753.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01015443.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   ||||||||==|||||||||||||| targets:233   AGUCGACUGUACCUGAGUUUCCAC   256 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene15451 mRNA sequence	NA	coding protein	psRNATarget
JR570363.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   ||||||*|=||||||||||||||| targets:158   AGUCGAAUGCACCUGAGUUUCCAC   181 Target Full Sequence	2.0	TSA: Arachis hypogaea Ahy.Unigene30687 mRNA sequence	NA	coding protein	psRNATarget
GAER01005312.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   |**=||||==|||||||||||||| targets:13   AAAUGACUGUACCUGAGUUUCCAC   36 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene5317 mRNA sequence	NA	coding protein	psRNATarget
JR574947.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   ||||||||=|||||||||||=||| targets:158   AGUCGACUGCACCUGAGUUUUCAC   181 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene37984 mRNA sequence	NA	coding protein	psRNATarget
JR560456.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   ||||||||=|||||||||||=||| targets:555   AGUCGACUGCACCUGAGUUUUCAC   578 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene20432 mRNA sequence	NA	coding protein	psRNATarget
JR581646.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   |||=||||=|||=||||||||||| targets:147   AGUUGACUGCACUUGAGUUUCCAC   170 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene47526 mRNA sequence	NA	coding protein	psRNATarget
GAER01053760.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   ||*|*|||=||||||||||||=|| targets:128   AGCCAACUGCACCUGAGUUUCUAC   151 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene53800 mRNA sequence	NA	coding protein	psRNATarget
EZ733072.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   |*||*|||||||*||||||||||= targets:1706   AAUCAACUACACGUGAGUUUCCAU   1729 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1Contig12088.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01019374.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   **||*|||*|||*||||||||||| targets:1460   UAUCAACUUCACGUGAGUUUCCAC   1483 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene19383 mRNA sequence	NA	coding protein	psRNATarget
GAER01000418.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   |||=*|||==|||||||||||||= targets:79   AGUUAACUGUACCUGAGUUUCCAU   102 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene418 mRNA sequence	NA	coding protein	psRNATarget
GAER01055572.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   |||=*|||==*||||||||||||| targets:47   AGUUAACUGUUCCUGAGUUUCCAC   70 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene55614 mRNA sequence	NA	coding protein	psRNATarget
GAER01027481.1	ncRNA:24   UCAGCUGAUGUGGACUCAAAGGUG   1   ||*=|**|=||||||||||||||| targets:70   AGGUGCAUGCACCUGAGUUUCCAC   93 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene27499 mRNA sequence	NA	coding protein	psRNATarget