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BaseInfo

ncRNA ID novel_ahy_miR592
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:133824975-133825079 [+]
Reference genome Araip_v1.0
Source SRR1323745;SRR2922380;SRR2922381
Length 20
Mature sequence(if miRNA) 86 - CUCAAGAAAGCUGUGGGAGA - 105
Stem-loop(if miRNA) --                 A       UA  -U  AUCCAUCUCA   UCUUCUAAG
  UUCCACAGCUUUCUUGA CUUCUUG  UG  GC          ACU         U
  ||||||||||||||||| |||||||  ||  ||          |||         A
  AGGGUGUCGAAAGAACU GAAGAAC  AU  UG          CAU         A
AG                 C       CA  UC  ---------A   UAAUGUAUG
Stem-loop sequence UUCCACAGCUUUCUUGAACUUCUUGUAUGUGCAUCCAUCUCAACUUCUUCUAAGUAAGUAUGUAAUUACAGUCUUAACCAAGAAGCUCAAGAAAGCUGUGGGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058108.1
ncRNA:20   AGAGGGUGUCGAAAGAACUC   1
  ||||||||||||||||||||
targets:301   UCUCCCACAGCUUUCUUGAG   320

0.0 TSA: Arachis hypogaea Unigene58155 mRNA sequence NA coding protein psRNATarget
EZ721329.1
ncRNA:20   AGAGGGUGUCGAAAGAACUC   1
  ||||||*||||||||||||*
targets:528   UCUCCCUCAGCUUUCUUGAU   547

2.0 TSA: Arachis hypogaea CL1Contig345.Arhy mRNA sequence NA coding protein psRNATarget
JR545115.1
ncRNA:20   AGAGGGUGUCGAAAGAACUC   1
  *||=||||||||||*|||||
targets:36   CCUUCCACAGCUUUGUUGAG   55

2.5 TSA: Arachis hypogaea Ahy.Unigene4518 mRNA sequence NA coding protein psRNATarget
GAER01050307.1
ncRNA:20   AGAGGGUGUCGAAAGAACUC   1
  *||=||||||||||*|||||
targets:86   CCUUCCACAGCUUUGUUGAG   105

2.5 TSA: Arachis hypogaea Unigene50345 mRNA sequence NA coding protein psRNATarget
GAER01004792.1
ncRNA:20   AGAGGGUGUCGAAAGAACUC   1
  *|||=|*||||||||||||*
targets:219   ACUCUCUCAGCUUUCUUGAU   238

3.0 TSA: Arachis hypogaea Unigene4795 mRNA sequence NA coding protein psRNATarget
GAER01058066.1
ncRNA:20   AGAGGGUGUCGAAAGAACUC   1
  **|||*|||||||||||||*
targets:21   CAUCCAACAGCUUUCUUGAU   40

3.0 TSA: Arachis hypogaea Unigene58112 mRNA sequence NA coding protein psRNATarget