ncRNA ID | ath-miRf10375-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - GGCCGUCUUCGUCGACAUCGU - NA |
Stem-loop(if miRNA) |
    UC ACC    CG          GA    ----AA   UAACAAGAAAAAAACUCCAGCG CGAU  C   GUCG  GAAGAUGGCU  UUUG      UCU                      A ||||  |   ||||  ||||||||||  ||||      ||| GCUA  G   CAGC  CUUCUGCCGG  AGAC      GUC                      C     CU CUA    UG          --    GUUUAA   GCUGUCGCCUUUGUAGAGGCAA |
Stem-loop sequence | CGAUUCCACCGUCGCGGAAGAUGGCUGAUUUGAAUCUUAACAAGAAAAAAACUCCAGCGACAACGGAGAUGUUUCCGCUGUCGCUGAAUUUGCAGAGGCCGUCUUCGUCGACAUCGUCAUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001161299.1 |
|
2.5 | Arabidopsis thaliana exocyst complex component 84B (EXO84B), mRNA | exocyst complex component 84B(EXO84B) | coding protein | psRNATarget | |||||||||
NM_124361.5 |
|
2.5 | Arabidopsis thaliana exocyst complex component 84B (EXO84B), mRNA | exocyst complex component 84B(EXO84B) | coding protein | psRNATarget | |||||||||
NM_001161300.1 |
|
2.5 | Arabidopsis thaliana exocyst complex component 84B (EXO84B), mRNA | exocyst complex component 84B(EXO84B) | coding protein | psRNATarget | |||||||||
AY075643.1 |
|
2.5 | Arabidopsis thaliana AT5g49830/K21G20_4 mRNA, complete cds | NA | coding protein | psRNATarget |