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BaseInfo

ncRNA ID ath-miRf10375-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGCCGUCUUCGUCGACAUCGU - NA
Stem-loop(if miRNA)     UC ACC    CG          GA    ----AA   UAACAAGAAAAAAACUCCAGCG
CGAU  C   GUCG  GAAGAUGGCU  UUUG      UCU                      A
||||  |   ||||  ||||||||||  ||||      |||
GCUA  G   CAGC  CUUCUGCCGG  AGAC      GUC                      C
    CU CUA    UG          --    GUUUAA   GCUGUCGCCUUUGUAGAGGCAA
Stem-loop sequence CGAUUCCACCGUCGCGGAAGAUGGCUGAUUUGAAUCUUAACAAGAAAAAAACUCCAGCGACAACGGAGAUGUUUCCGCUGUCGCUGAAUUUGCAGAGGCCGUCUUCGUCGACAUCGUCAUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001161299.1
ncRNA:21   UGCUACAGCUGCUUCUGCCGG   1
  ||||||*||=|||||||||||
targets:271   ACGAUGGCGGCGAAGACGGCC   291

2.5 Arabidopsis thaliana exocyst complex component 84B (EXO84B), mRNA exocyst complex component 84B(EXO84B) coding protein psRNATarget
NM_124361.5
ncRNA:21   UGCUACAGCUGCUUCUGCCGG   1
  ||||||*||=|||||||||||
targets:321   ACGAUGGCGGCGAAGACGGCC   341

2.5 Arabidopsis thaliana exocyst complex component 84B (EXO84B), mRNA exocyst complex component 84B(EXO84B) coding protein psRNATarget
NM_001161300.1
ncRNA:21   UGCUACAGCUGCUUCUGCCGG   1
  ||||||*||=|||||||||||
targets:271   ACGAUGGCGGCGAAGACGGCC   291

2.5 Arabidopsis thaliana exocyst complex component 84B (EXO84B), mRNA exocyst complex component 84B(EXO84B) coding protein psRNATarget
AY075643.1
ncRNA:21   UGCUACAGCUGCUUCUGCCGG   1
  ||||||*||=|||||||||||
targets:221   ACGAUGGCGGCGAAGACGGCC   241

2.5 Arabidopsis thaliana AT5g49830/K21G20_4 mRNA, complete cds NA coding protein psRNATarget