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BaseInfo

ncRNA ID novel_ahy_miR583
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:16963281-16963364 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 64 - UUGAGCCGCGUCAAUAUCUCA - 84
Stem-loop(if miRNA) --             C       U  AG     C    GACA
  AGGUAUUGACGUG CUCAAUU GA  ACAUA UUGA    A
  ||||||||||||| ||||||| ||  ||||| ||||
  UCUAUAACUGCGC GAGUUAA UU  UGUAU AACU    G
AC             C       U  GA     U    AAUA
Stem-loop sequence AGGUAUUGACGUGCCUCAAUUUGAAGACAUACUUGAGACAAGAUAAUCAAUUAUGUAGUUUAAUUGAGCCGCGUCAAUAUCUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01023028.1
ncRNA:21   ACUCUAUAACUGCGCCGAGUU   1
  *|=|||||||=||||||||||
targets:1324   AGGGAUAUUGGCGCGGCUCAA   1344

2.5 TSA: Arachis hypogaea Unigene23039 mRNA sequence NA coding protein psRNATarget
JR558643.1
ncRNA:21   ACUCUAUAACUGCGCCGAGUU   1
  *|=|||||||=||||||||||
targets:1302   AGGGAUAUUGGCGCGGCUCAA   1322

2.5 TSA: Arachis hypogaea Ahy.Unigene18535 mRNA sequence NA coding protein psRNATarget
GAER01023027.1
ncRNA:21   ACUCUAUAACUGCGCCGAGUU   1
  *|=|||||||=||||||||||
targets:3079   AGGGAUAUUGGCGCGGCUCAA   3099

2.5 TSA: Arachis hypogaea Unigene23038 mRNA sequence NA coding protein psRNATarget