Search result

BaseInfo

ncRNA ID novel_ahy_miR581
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:16700875-16700972 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - AACCCUCAAAGGCUUCCAUUC - 21
Stem-loop(if miRNA) --     UC          A        -       -------A     UUAU
  AACCC  AAAGGCUUCC UUCUUUGU AUGUUCA        UUCCA    U
  |||||  |||||||||| |||||||| |||||||        |||||
  UUGGG  UUUCUGAGGG AAGAAAUA UACAAGU        AAGGU    C
UG     UU          G        A       AAAAAAGA     UUAA
Stem-loop sequence AACCCUCAAAGGCUUCCAUUCUUUGUAUGUUCAAUUCCAUUAUUCAAUUUGGAAAGAAAAAAUGAACAUAAUAAAGAAGGGGAGUCUUUUUGGGUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ721288.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:546   UGAUGGGAGCCGUUGAGGGUU   566

2.5 TSA: Arachis hypogaea CL1Contig304.Arhy mRNA sequence NA coding protein psRNATarget
EZ723829.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:554   UGAUGGGAGCCGUUGAGGGUU   574

2.5 TSA: Arachis hypogaea CL1Contig2845.Arhy mRNA sequence NA coding protein psRNATarget
GAER01035568.1
ncRNA:21   CUUACCUUCGGAAACUCCCAA   1
  *=||||=||||*|||||||||
targets:1181   UGAUGGGAGCCGUUGAGGGUU   1201

2.5 TSA: Arachis hypogaea Unigene35591 mRNA sequence NA coding protein psRNATarget