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BaseInfo

ncRNA ID novel_ahy_miR576
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:43795448-43795544 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 77 - UUUGGGUCUUGAGAGUACAUG - 97
Stem-loop(if miRNA) --            U  A       CAUA   --AU     AUACUUU  UC
  UGUGCUCUCAAG CC AAACAUU    UCG    GCUUU       CA  A
  |||||||||||| || |||||||    |||    |||||       ||
  ACAUGAGAGUUC GG UUUGUAG    AGC    UGAAA       GU  A
GU            U  G       ---A   GGUU     --AACUU  UU
Stem-loop sequence UGUGCUCUCAAGUCCAAAACAUUCAUAUCGAUGCUUUAUACUUUCAUCAAUUUGUUCAAAAAGUUUGGCGAAGAUGUUUGGGUCUUGAGAGUACAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR551158.1
ncRNA:21   GUACAUGAGAGUUCUGGGUUU   1
  *||||||||||||||||||||
targets:172   AAUGUACUCUCAAGACCCAAA   192

0.0 TSA: Arachis hypogaea Ahy.Unigene10790 mRNA sequence NA coding protein psRNATarget
HG764750.1
ncRNA:21   GUACAUGAGAGUUCUGGGUUU   1
  *||||||||||||||||||||
targets:241   AAUGUACUCUCAAGACCCAAA   261

0.0 Arachis hypogaea mRNA for ABA 8'-hydroxylase (CYP707A1 gene), cultivar Yueyou 7 NA coding protein psRNATarget
EZ728265.1
ncRNA:21   GUACAUGAGAGUUCUGGGUUU   1
  *|||||=||||||||||||||
targets:296   AAUGUAUUCUCAAGACCCAAA   316

1.0 TSA: Arachis hypogaea CL1Contig7281.Arhy mRNA sequence NA coding protein psRNATarget
GAER01022889.1
ncRNA:21   GUACAUGAGAGUUCUGGGUUU   1
  *|||||=||||||||||||||
targets:252   AAUGUAUUCUCAAGACCCAAA   272

1.0 TSA: Arachis hypogaea Unigene22900 mRNA sequence NA coding protein psRNATarget