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BaseInfo

ncRNA ID novel_ahy_miR559
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:77881712-77881839 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 105 - AUGUUAGAGACUUAAAUAAGACGA - 128
Stem-loop(if miRNA) --              C  U      C     C U      U      CAC   --CAAU    U
  GUCUUAUUUAAGUC CU AUGUUU AAAAU G CUCAGU UUGUCC   CGU      UCUG U
  |||||||||||||| || |||||| ||||| | |||||| ||||||   |||      ||||
  CAGAAUAAAUUCAG GA UGUAAA UUUUA C GAGUUA AACAGG   GCA      AGGC A
AG              A  U      A     A U      C      ACA   AUCGCU    A
Stem-loop sequence GUCUUAUUUAAGUCCCUUAUGUUUCAAAAUCGUCUCAGUUUUGUCCCACCGUCAAUUCUGUUAACGGAUCGCUAACGACAGGACAACAUUGAGUCAAUUUUAAAAUGUUAGAGACUUAAAUAAGACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR581961.1
ncRNA:24   AGCAGAAUAAAUUCAGAGAUUGUA   1
  |||||*||||||||||||||||=|
targets:183   UCGUCCUAUUUAAGUCUCUAACGU   206

2.5 TSA: Arachis hypogaea Ahy.Unigene47841 mRNA sequence NA coding protein psRNATarget