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BaseInfo

ncRNA ID novel_ahy_miR557
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:71730726-71730801 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 53 - AUACUGUAAACGAGAUAAGACAUG - 76
Stem-loop(if miRNA) --                         C  G   A  U
  UGUCUUAUCUCGUUUAUAGUGUAAA GA AUA GU U
  ||||||||||||||||||||||||| || ||| ||
  ACAGAAUAGAGCAAAUGUCAUAUUU CU UAU CA A
GU                         A  A   A  C
Stem-loop sequence UGUCUUAUCUCGUUUAUAGUGUAAACGAGAUAAGUUUACACAUAUAUCAUUUAUACUGUAAACGAGAUAAGACAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   GUACAGAAUAGAGCAAAUGUCAUA   1
  ||---|*|||||||||||||||=|
targets:80   CA---CGUAUCUCGUUUACAGUGU   100

2.5 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
GAER01008490.1
ncRNA:24   GUACAGAAUAGAGCAAAUGUCAUA   1
  ||---||||||||||||||||*|*
targets:13   CA---CUUAUCUCGUUUACAGCAA   33

2.5 TSA: Arachis hypogaea Unigene8497 mRNA sequence NA coding protein psRNATarget
JR549274.1
ncRNA:24   GUAC-----AGAAUAGAGCAAAUGUCAUA   1
  *|||-----|*|*|||||||||||||||*
targets:162   GAUGGGGAAUAUAAUCUCGUUUACAGUAA   190

3.0 TSA: Arachis hypogaea Ahy.Unigene8861 mRNA sequence NA coding protein psRNATarget