Search result

BaseInfo

ncRNA ID	novel_ahy_miR556
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B02:57274974-57275039 [+]
Reference genome	Araip_v1.0
Source	SRR1323745
Length	23
Mature sequence(if miRNA)	44 - AACUUAGAGUUUGGUUGUGGGAG - 66
Stem-loop(if miRNA)	--    AC         A         U  GG A   CCCA  ACCAAACUU GAGUUUGGU GU  G G   ||||  ||||||||| ||||||||| ||  |   GGGU  UGGUUUGAG UUCAAACCA CA  C U GA    GU         A         -  -A U
Stem-loop sequence	CCCAACACCAAACUUAGAGUUUGGUUGUGGGAGUUCAACACCAAACUUAGAGUUUGGUUGUGGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ753146.1	ncRNA:23   GAGGGUGUUGGUUUGAGAUUCAA   1   ***|||||||||||||||||||| targets:354   AGGCCACAACCAAACUCUAAGUU   376 Target Full Sequence	0.0	TSA: Arachis hypogaea CL7142Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR589096.1	ncRNA:23   GAGGGUGUUGGUUUGAGAUUCAA   1   ||||||=|*|||||||||||||| targets:1   CUCCCAUAUCCAAACUCUAAGUU   23 Target Full Sequence	2.0	TSA: Arachis hypogaea Ahy.Unigene57524 mRNA sequence	NA	coding protein	psRNATarget
EZ753146.1	ncRNA:23   GAGGGUGUUGGUUUGAGAUUCAA   1   |*||||||==||||||||||||| targets:321   CCCCCACAGUCAAACUCUAAGUU   343 Target Full Sequence	2.0	TSA: Arachis hypogaea CL7142Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ753146.1	ncRNA:23   GAGGGUGUUGGUUUGAGAUUCAA   1   |||=||=|*|||||||||||||| targets:387   CUCUCAUAUCCAAACUCUAAGUU   409 Target Full Sequence	2.0	TSA: Arachis hypogaea CL7142Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget